Literature DB >> 32027495

Tautomer Database: A Comprehensive Resource for Tautomerism Analyses.

Devendra K Dhaked1, Laura Guasch1, Marc C Nicklaus1.   

Abstract

We report a database of tautomeric structures that contains 2819 tautomeric tuples extracted from 171 publications. Each tautomeric entry has been annotated with experimental conditions reported in the respective publication, plus bibliographic details, structural identifiers (e.g., NCI/CADD identifiers FICTS, FICuS, uuuuu, and Standard InChI), and chemical information (e.g., SMILES, molecular weight). The majority of tautomeric tuples found were pairs; the remaining 10% were triples, quadruples, or quintuples, amounting to a total number of structures of 5977. The types of tautomerism were mainly prototropic tautomerism (79%), followed by ring-chain (13%) and valence tautomerism (8%). The experimental conditions reported in the publications included about 50 pure solvents and 9 solvent mixtures with 26 unique spectroscopic or nonspectroscopic methods. 1H and 13C NMR were the most frequently used methods. A total of 77 different tautomeric transform rules (SMIRKS) are covered by at least one example tuple in the database. This database is freely available as a spreadsheet at https://cactus.nci.nih.gov/download/tautomer/.

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Year:  2020        PMID: 32027495     DOI: 10.1021/acs.jcim.9b01156

Source DB:  PubMed          Journal:  J Chem Inf Model        ISSN: 1549-9596            Impact factor:   4.956


  2 in total

1.  Fitting quantum machine learning potentials to experimental free energy data: predicting tautomer ratios in solution.

Authors:  Marcus Wieder; Josh Fass; John D Chodera
Journal:  Chem Sci       Date:  2021-07-19       Impact factor: 9.825

2.  Novel mechanisms of the conformational transformations of the biologically important G·C nucleobase pairs in Watson-Crick, Hoogsteen and wobble configurations via the mutual rotations of the bases around the intermolecular H-bonds: a QM/QTAIM study.

Authors:  Ol'ha O Brovarets'; Alona Muradova; Dmytro M Hovorun
Journal:  RSC Adv       Date:  2021-07-27       Impact factor: 4.036

  2 in total

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