Literature DB >> 32026459

Bayesian modeling of multiple structural connectivity networks during the progression of Alzheimer's disease.

Christine B Peterson1, Nathan Osborne2, Francesco C Stingo3, Pierrick Bourgeat4, James D Doecke4, Marina Vannucci2.   

Abstract

Alzheimer's disease is the most common neurodegenerative disease. The aim of this study is to infer structural changes in brain connectivity resulting from disease progression using cortical thickness measurements from a cohort of participants who were either healthy control, or with mild cognitive impairment, or Alzheimer's disease patients. For this purpose, we develop a novel approach for inference of multiple networks with related edge values across groups. Specifically, we infer a Gaussian graphical model for each group within a joint framework, where we rely on Bayesian hierarchical priors to link the precision matrix entries across groups. Our proposal differs from existing approaches in that it flexibly learns which groups have the most similar edge values, and accounts for the strength of connection (rather than only edge presence or absence) when sharing information across groups. Our results identify key alterations in structural connectivity that may reflect disruptions to the healthy brain, such as decreased connectivity within the occipital lobe with increasing disease severity. We also illustrate the proposed method through simulations, where we demonstrate its performance in structure learning and precision matrix estimation with respect to alternative approaches.
© 2020 The International Biometric Society.

Entities:  

Keywords:  AIBL study; Alzheimer's disease; Bayesian inference; Gaussian graphical model; MRI data

Mesh:

Year:  2020        PMID: 32026459      PMCID: PMC8906798          DOI: 10.1111/biom.13235

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   2.571


  16 in total

1.  Structural covariance in the human cortex.

Authors:  Andrea Mechelli; Karl J Friston; Richard S Frackowiak; Cathy J Price
Journal:  J Neurosci       Date:  2005-09-07       Impact factor: 6.167

2.  Spatial patterns of cortical thinning in mild cognitive impairment and Alzheimer's disease.

Authors:  Vivek Singh; Howard Chertkow; Jason P Lerch; Alan C Evans; Adrienne E Dorr; Noor Jehan Kabani
Journal:  Brain       Date:  2006-09-28       Impact factor: 13.501

3.  Sparse inverse covariance estimation with the graphical lasso.

Authors:  Jerome Friedman; Trevor Hastie; Robert Tibshirani
Journal:  Biostatistics       Date:  2007-12-12       Impact factor: 5.899

4.  Structural insights into aberrant topological patterns of large-scale cortical networks in Alzheimer's disease.

Authors:  Yong He; Zhang Chen; Alan Evans
Journal:  J Neurosci       Date:  2008-04-30       Impact factor: 6.167

5.  Joint estimation of multiple graphical models.

Authors:  Jian Guo; Elizaveta Levina; George Michailidis; Ji Zhu
Journal:  Biometrika       Date:  2011-02-09       Impact factor: 2.445

6.  The joint graphical lasso for inverse covariance estimation across multiple classes.

Authors:  Patrick Danaher; Pei Wang; Daniela M Witten
Journal:  J R Stat Soc Series B Stat Methodol       Date:  2014-03       Impact factor: 4.488

7.  Sharing and Specificity of Co-expression Networks across 35 Human Tissues.

Authors:  Emma Pierson; Daphne Koller; Alexis Battle; Sara Mostafavi; Kristin G Ardlie; Gad Getz; Fred A Wright; Manolis Kellis; Simona Volpi; Emmanouil T Dermitzakis
Journal:  PLoS Comput Biol       Date:  2015-05-13       Impact factor: 4.475

8.  Early diagnosis of Alzheimer's disease using cortical thickness: impact of cognitive reserve.

Authors:  Olivier Querbes; Florent Aubry; Jérémie Pariente; Jean-Albert Lotterie; Jean-François Démonet; Véronique Duret; Michèle Puel; Isabelle Berry; Jean-Claude Fort; Pierre Celsis
Journal:  Brain       Date:  2009-05-12       Impact factor: 13.501

Review 9.  Imaging structural co-variance between human brain regions.

Authors:  Aaron Alexander-Bloch; Jay N Giedd; Ed Bullmore
Journal:  Nat Rev Neurosci       Date:  2013-03-27       Impact factor: 34.870

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  2 in total

Review 1.  Bayesian graphical models for modern biological applications.

Authors:  Yang Ni; Veerabhadran Baladandayuthapani; Marina Vannucci; Francesco C Stingo
Journal:  Stat Methods Appt       Date:  2021-05-27

2.  Plasma p-tau181 shows stronger network association to Alzheimer's disease dementia than neurofilament light and total tau.

Authors:  Brandon Frank; Madeline Ally; Bailee Brekke; Henrik Zetterberg; Kaj Blennow; Michael A Sugarman; Nicholas J Ashton; Thomas K Karikari; Yorghos Tripodis; Brett Martin; Joseph N Palmisano; Eric G Steinberg; Irene Simkina; Katherine W Turk; Andrew E Budson; Maureen K O'Connor; Rhoda Au; Lee E Goldstein; Gyungah R Jun; Neil W Kowall; Thor D Stein; Ann C McKee; Ronald Killiany; Wei Qiao Qiu; Robert A Stern; Jesse Mez; Michael L Alosco
Journal:  Alzheimers Dement       Date:  2021-12-02       Impact factor: 16.655

  2 in total

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