Literature DB >> 32024766

Integrating CRISPR Engineering and hiPSC-Derived 2D Disease Modeling Systems.

Kristina Rehbach1,2, Michael B Fernando2,3,4, Kristen J Brennand5,2,4,6,7.   

Abstract

Human induced pluripotent stem cells (hiPSCs) have revolutionized research on human diseases, particularly neurodegenerative and psychiatric disorders, making it possible to study mechanisms of disease risk and initiation in otherwise inaccessible patient-specific cells. Today, the integration of CRISPR engineering approaches with hiPSC-based models permits precise isogenic comparisons of human neurons and glia. This review is intended as a guideline for neuroscientists and clinicians interested in translating their research to hiPSC-based studies. It offers state-of-the-art approaches to tackling the challenges that are unique to human in vitro disease models, particularly interdonor and intradonor variability, and limitations in neuronal maturity and circuit complexity. Finally, we provide a detailed overview of the immense possibilities the field has to offer, highlighting efficient neural differentiation and induction strategies for the major brain cell types and providing perspective into integrating CRISPR-based methods into study design. The combination of hiPSC-based disease modeling, CRISPR technology, and high-throughput approaches promises to advance our scientific knowledge and accelerate progress in drug discovery.Dual Perspectives Companion Paper: Studying Human Neurodevelopment and Diseases Using 3D Brain Organoids, by Ai Tian, Julien Muffat, and Yun Li.
Copyright © 2020 the authors.

Entities:  

Keywords:  CRISPR; Human induced pluripotent stem cells; differentiation; disease modeling; induction; psychiatric genetics

Mesh:

Year:  2020        PMID: 32024766      PMCID: PMC7002154          DOI: 10.1523/JNEUROSCI.0518-19.2019

Source DB:  PubMed          Journal:  J Neurosci        ISSN: 0270-6474            Impact factor:   6.167


  128 in total

1.  Automated, high-throughput derivation, characterization and differentiation of induced pluripotent stem cells.

Authors:  Daniel Paull; Ana Sevilla; Hongyan Zhou; Aana Kim Hahn; Hesed Kim; Christopher Napolitano; Alexander Tsankov; Linshan Shang; Katie Krumholz; Premlatha Jagadeesan; Chris M Woodard; Bruce Sun; Thierry Vilboux; Matthew Zimmer; Eliana Forero; Dorota N Moroziewicz; Hector Martinez; May Christine V Malicdan; Keren A Weiss; Lauren B Vensand; Carmen R Dusenberry; Hannah Polus; Karla Therese L Sy; David J Kahler; William A Gahl; Susan L Solomon; Stephen Chang; Alexander Meissner; Kevin Eggan; Scott A Noggle
Journal:  Nat Methods       Date:  2015-08-03       Impact factor: 28.547

2.  Neuron-specific signatures in the chromosomal connectome associated with schizophrenia risk.

Authors:  Prashanth Rajarajan; Tyler Borrman; Will Liao; Nadine Schrode; Erin Flaherty; Charlize Casiño; Samuel Powell; Chittampalli Yashaswini; Elizabeth A LaMarca; Bibi Kassim; Behnam Javidfar; Sergio Espeso-Gil; Aiqun Li; Hyejung Won; Daniel H Geschwind; Seok-Man Ho; Matthew MacDonald; Gabriel E Hoffman; Panos Roussos; Bin Zhang; Chang-Gyu Hahn; Zhiping Weng; Kristen J Brennand; Schahram Akbarian
Journal:  Science       Date:  2018-12-14       Impact factor: 47.728

3.  Neurons derived from patients with bipolar disorder divide into intrinsically different sub-populations of neurons, predicting the patients' responsiveness to lithium.

Authors:  S Stern; R Santos; M C Marchetto; A P D Mendes; G A Rouleau; S Biesmans; Q-W Wang; J Yao; P Charnay; A G Bang; M Alda; F H Gage
Journal:  Mol Psychiatry       Date:  2017-02-28       Impact factor: 15.992

4.  Generation and isolation of oligodendrocyte progenitor cells from human pluripotent stem cells.

Authors:  Panagiotis Douvaras; Valentina Fossati
Journal:  Nat Protoc       Date:  2015-07-02       Impact factor: 13.491

5.  Directed differentiation of human pluripotent stem cells to cerebral cortex neurons and neural networks.

Authors:  Yichen Shi; Peter Kirwan; Frederick J Livesey
Journal:  Nat Protoc       Date:  2012-09-13       Impact factor: 13.491

Review 6.  New approaches for brain repair-from rescue to reprogramming.

Authors:  Roger A Barker; Magdalena Götz; Malin Parmar
Journal:  Nature       Date:  2018-05-16       Impact factor: 49.962

7.  Induction of human neuronal cells by defined transcription factors.

Authors:  Zhiping P Pang; Nan Yang; Thomas Vierbuchen; Austin Ostermeier; Daniel R Fuentes; Troy Q Yang; Ami Citri; Vittorio Sebastiano; Samuele Marro; Thomas C Südhof; Marius Wernig
Journal:  Nature       Date:  2011-05-26       Impact factor: 49.962

8.  Human iPSC neurons display activity-dependent neurotransmitter secretion: aberrant catecholamine levels in schizophrenia neurons.

Authors:  Vivian Hook; Kristen J Brennand; Yongsung Kim; Thomas Toneff; Lydiane Funkelstein; Kelly C Lee; Michael Ziegler; Fred H Gage
Journal:  Stem Cell Reports       Date:  2014-09-11       Impact factor: 7.765

9.  Molecular and functional variation in iPSC-derived sensory neurons.

Authors:  Jeremy Schwartzentruber; Stefanie Foskolou; Helena Kilpinen; Julia Rodrigues; Kaur Alasoo; Andrew J Knights; Minal Patel; Angela Goncalves; Rita Ferreira; Caroline Louise Benn; Anna Wilbrey; Magda Bictash; Emma Impey; Lishuang Cao; Sergio Lainez; Alexandre Julien Loucif; Paul John Whiting; Alex Gutteridge; Daniel J Gaffney
Journal:  Nat Genet       Date:  2017-12-11       Impact factor: 38.330

10.  Generation and assembly of human brain region-specific three-dimensional cultures.

Authors:  Steven A Sloan; Jimena Andersen; Anca M Pașca; Fikri Birey; Sergiu P Pașca
Journal:  Nat Protoc       Date:  2018-09       Impact factor: 13.491

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  4 in total

1.  Analysis framework and experimental design for evaluating synergy-driving gene expression.

Authors:  Nadine Schrode; Carina Seah; P J Michael Deans; Gabriel Hoffman; Kristen J Brennand
Journal:  Nat Protoc       Date:  2021-01-11       Impact factor: 13.491

2.  Dystonia-specific mutations in THAP1 alter transcription of genes associated with neurodevelopment and myelin.

Authors:  Aloysius Domingo; Rachita Yadav; Shivangi Shah; William T Hendriks; Serkan Erdin; Dadi Gao; Kathryn O'Keefe; Benjamin Currall; James F Gusella; Nutan Sharma; Laurie J Ozelius; Michelle E Ehrlich; Michael E Talkowski; D Cristopher Bragg
Journal:  Am J Hum Genet       Date:  2021-10-20       Impact factor: 11.025

Review 3.  Massively parallel techniques for cataloguing the regulome of the human brain.

Authors:  Kayla G Townsley; Kristen J Brennand; Laura M Huckins
Journal:  Nat Neurosci       Date:  2020-11-16       Impact factor: 28.771

Review 4.  Mental health dished up-the use of iPSC models in neuropsychiatric research.

Authors:  Rhiannon V McNeill; Georg C Ziegler; Franziska Radtke; Matthias Nieberler; Klaus-Peter Lesch; Sarah Kittel-Schneider
Journal:  J Neural Transm (Vienna)       Date:  2020-05-07       Impact factor: 3.575

  4 in total

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