| Literature DB >> 32023808 |
Raheem Ullah1,2, Aamir Shehzad1, Majid Ali Shah1, Matteo De March2, Fouzia Ismat1, Mazhar Iqbal1, Silvia Onesti2, Moazur Rahman1, Michael J McPherson3.
Abstract
The human zinc transporter 8 (hZnT8) plays important roles in the storage of insulin in the secretory vesicles of pancreatic β cells. hZnT8 consists of a transmembrane domain, with its N- and C-termini protruding into the cytoplasm. Interestingly, the exchange of arginine to tryptophan at position 325 in the C-terminal domain (CTD) increases the risk of developing type 2 diabetes mellitus (T2D). In the present study, the CTDs of hZnT8 (the wild-type (WT) and its disease risk variant (R325W)) were expressed, purified, and characterized in their native forms by biophysical techniques. The data reveal that the CTDs form tetramers which are stabilized by zinc binding, and exhibit negligible differences in their secondary structure content and zinc-binding affinities in solution. These findings provide the basis for conducting further structural studies aimed at unravelling the molecular mechanism underlying the increased susceptibility to develop T2D, which is modulated by the disease risk variant.Entities:
Keywords: C-terminal domain; biophysical characterization; disease risk variant; human zinc transporter hZnT8
Mesh:
Substances:
Year: 2020 PMID: 32023808 PMCID: PMC7037036 DOI: 10.3390/ijms21030926
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Figure 1Cartoon diagram of the human zinc transporter 8 (hZnT8) protein topology depicting the location of the R325W substitution in the C-terminal domain (CTD). Like many other Zn+2 transporters (ZnTs), hZnT8 consists of a transmembrane domain (TMD), with its N- and C-termini facing the cytoplasm [8].
Figure 2Analysis of the hZnT8 CTDs through gel filtration and analytical ultracentrifugation. (a,b) Gel filtration chromatograms of the wild-type (WT) CTD (a) and the R325W CTD (b) showing an apparent molecular mass of approximately 40 kDa. The dotted lines represent the following protein standards: aldolase (158 kDa) (peak 1), ovalbumin (44 kDa) (peak 2), carbonic anhydrase (29 kDa) (peak 3), and ribonuclease (13.7 kDa) (peak 4). Inset shows the SDS-PAGE analysis of the WT CTD (a) and the R325W CTD (b) purified by size exclusion chromatography. (c) A major peak corresponding to the tetrameric form (39.6 kDa) for the WT CTD obtained using analytical ultracentrifugation. (d) Gel filtration chromatograms of the WT CTD with 5 mM ethylenediaminetetraacetic acid (EDTA) (blue dotted lines), 8 M urea (brown dotted lines), and 3 mM β-mercaptoethanol (green dotted lines) are depicted. Protein aggregates formed in the presence of urea are shown with an asterisk (*).
Figure 3Zn+2 binding analysis of the hZnT8 CTDs. (a,b) Fluorescence emission spectra of the WT CTD (a) and the R325W CTD (b) before (continuous lines) and after (dotted lines) addition of 50 mM Zn+2 are shown. (c,d) Concentration-dependent Zn+2-binding affinity curves for the WT CTD (c) and the R325W CTD (d). The apparent affinities (K values) for Zn+2 binding to the WT CTD and the R325W CTD were obtained by nonlinear fitting of the respective quench/concentration curves to a two-binding-site model. The excitation and emission wavelengths used in the experiments were 285 nm and 350 nm, respectively. Fluorescence was recorded at excitation and emission slit widths of 2.0. Data points and error bars represent the mean and standard deviation of three individual measurements, respectively.
Figure 4Circular dichroism (CD) spectroscopy of the hZnT8 CTDs. (a,b) CD spectra of the WT CTD (a) and the R325W CTD (b) in the absence (black continuous lines) and in the presence (red dotted lines) of 1 mM Zn+2. Blue dotted lines represent the CD spectra of the CTDs that were heated up to 90 °C followed by an attempt of refolding upon cooling to 25 °C.
Figure 5Analysis of the secondary structure content of the hZnT8 CTDs by Fourier transform infrared (FT-IR) spectroscopy. (a,b) The second derivative and amide I region of FT-IR spectra of a hydrated film of the WT CTD (a) and the R325W CTD (b) are shown as thick grey lines. The bands obtained by deconvolution are also depicted. The dotted red line represents the curve fitted using the component bands. The peak position of the spectral components and their assignments are also shown.
Secondary structure content of the WT CTD and the R325W CTD analyzed through spectroscopic techniques in the current study.
| Protein | α-Helix (%) | β-Sheet (%) | β-Turn (%) | Random Coil (%) | Technique |
|---|---|---|---|---|---|
| WT CTD | 41 | 15 | 13 | 31 | CD spectroscopy 1 |
| 46 | 10 | 17 | 27 | CD spectroscopy 2 | |
| R325W CTD | 46 | 12 | 13 | 29 | CD spectroscopy 1 |
| 53 | 10 | 17 | 20 | CD spectroscopy 2 | |
| WT CTD | 29.6 | 26.1 | 27 | 17.3 | FT-IR spectroscopy |
| R325W CTD | 27 | 24 | 25 | 24 | FT-IR spectroscopy |
1 CD spectra of the WT CTD and the R325W CTD in the absence of Zn+2 (shown in Figure 4; black continuous lines) were analyzed with the protein concentration-independent method using a web-based server at http://perry.freeshell.org/raussens.html [30]. 2 CD spectra were analyzed using the DichroWeb server at http://dichroweb.cryst.bbk.ac.uk/html/home.shtml [31,32] and the program CONTIN/reference set 3 [33].