Literature DB >> 32016679

The Rapid Regenerative Response of a Model Sea Anemone Species Exaiptasia pallida Is Characterised by Tissue Plasticity and Highly Coordinated Cell Communication.

Chloé A van der Burg1,2, Ana Pavasovic3,4, Edward K Gilding5, Elise S Pelzer3,4, Joachim M Surm6, Hayden L Smith7,8, Terence P Walsh3,4, Peter J Prentis7,8.   

Abstract

Regeneration of a limb or tissue can be achieved through multiple different pathways and mechanisms. The sea anemone Exaiptasia pallida has been observed to have excellent regenerative proficiency, but this has not yet been described transcriptionally. In this study, we examined the genetic expression changes during a regenerative timecourse and reported key genes involved in regeneration and wound healing. We found that the major response was an early (within the first 8 h) upregulation of genes involved in cellular movement and cell communication, which likely contribute to a high level of tissue plasticity resulting in the rapid regeneration response observed in this species. We find the immune system was only transcriptionally active in the first 8 h post-amputation and conclude, in accordance with previous literature, that the immune system and regeneration have an inverse relationship. Fifty-nine genes (3.8% of total) differentially expressed during regeneration were identified as having no orthologues in other species, indicating that regeneration in E. pallida may rely on the activation of species-specific novel genes. Additionally, taxonomically restricted novel genes, including species-specific novels, and highly conserved genes were identified throughout the regenerative timecourse, showing that both may work in concert to achieve complete regeneration.

Entities:  

Keywords:  Cnidaria; Evolution; Immune system; QuantSeq; Timecourse; Transcriptomics

Mesh:

Year:  2020        PMID: 32016679     DOI: 10.1007/s10126-020-09951-w

Source DB:  PubMed          Journal:  Mar Biotechnol (NY)        ISSN: 1436-2228            Impact factor:   3.619


  73 in total

1.  Sea anemone genome reveals ancestral eumetazoan gene repertoire and genomic organization.

Authors:  Nicholas H Putnam; Mansi Srivastava; Uffe Hellsten; Bill Dirks; Jarrod Chapman; Asaf Salamov; Astrid Terry; Harris Shapiro; Erika Lindquist; Vladimir V Kapitonov; Jerzy Jurka; Grigory Genikhovich; Igor V Grigoriev; Susan M Lucas; Robert E Steele; John R Finnerty; Ulrich Technau; Mark Q Martindale; Daniel S Rokhsar
Journal:  Science       Date:  2007-07-06       Impact factor: 47.728

Review 2.  Early evolution of symmetry and polarity in metazoan body plans.

Authors:  Michaël Manuel
Journal:  C R Biol       Date:  2008-11-28       Impact factor: 1.583

3.  Evidence for the local evolution of mechanisms underlying limb regeneration in salamanders.

Authors:  A Acely Garza-Garcia; Paul C Driscoll; Jeremy P Brockes
Journal:  Integr Comp Biol       Date:  2010-04-21       Impact factor: 3.326

4.  TIR-domain-containing protein repertoire of nine anthozoan species reveals coral-specific expansions and uncharacterized proteins.

Authors:  Angela Z Poole; Virginia M Weis
Journal:  Dev Comp Immunol       Date:  2014-06-13       Impact factor: 3.636

Review 5.  Innate immune system and tissue regeneration in planarians: an area ripe for exploration.

Authors:  T Harshani Peiris; Katrina K Hoyer; Néstor J Oviedo
Journal:  Semin Immunol       Date:  2014-07-28       Impact factor: 11.130

6.  Regeneration in distantly related species: common strategies and pathways.

Authors:  Maria Rita Fumagalli; Stefano Zapperi; Caterina A M La Porta
Journal:  NPJ Syst Biol Appl       Date:  2018-01-11

7.  A transcriptional time-course analysis of oral vs. aboral whole-body regeneration in the Sea anemone Nematostella vectensis.

Authors:  Amos A Schaffer; Michael Bazarsky; Karine Levy; Vered Chalifa-Caspi; Uri Gat
Journal:  BMC Genomics       Date:  2016-09-07       Impact factor: 3.969

8.  Transcriptomic investigation of wound healing and regeneration in the cnidarian Calliactis polypus.

Authors:  Zachary K Stewart; Ana Pavasovic; Daniella H Hock; Peter J Prentis
Journal:  Sci Rep       Date:  2017-02-02       Impact factor: 4.379

9.  OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy.

Authors:  David M Emms; Steven Kelly
Journal:  Genome Biol       Date:  2015-08-06       Impact factor: 13.583

10.  The bilaterian head patterning gene six3/6 controls aboral domain development in a cnidarian.

Authors:  Chiara Sinigaglia; Henriette Busengdal; Lucas Leclère; Ulrich Technau; Fabian Rentzsch
Journal:  PLoS Biol       Date:  2013-02-19       Impact factor: 8.029

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  5 in total

Review 1.  Nematostella vectensis, an Emerging Model for Deciphering the Molecular and Cellular Mechanisms Underlying Whole-Body Regeneration.

Authors:  Eric Röttinger
Journal:  Cells       Date:  2021-10-08       Impact factor: 6.600

2.  Identification, diversity and domain structure analysis of mucin and mucin-like genes in sea anemone Actinia tenebrosa.

Authors:  Alaa Haridi
Journal:  PeerJ       Date:  2022-05-05       Impact factor: 3.061

3.  Genome of the sea anemone Exaiptasia pallida and transcriptome profiles during tentacle regeneration.

Authors:  Cheryl W Y Shum; Wenyan Nong; Wai Lok So; Yiqian Li; Zhe Qu; Ho Yin Yip; Thomas Swale; Put O Ang; King Ming Chan; Ting Fung Chan; Ka Hou Chu; Apple P Y Chui; Kwok Fai Lau; Sai Ming Ngai; Fei Xu; Jerome H L Hui
Journal:  Front Cell Dev Biol       Date:  2022-08-17

4.  Tentacle patterning during Exaiptasia diaphana pedal lacerate development differs between symbiotic and aposymbiotic animals.

Authors:  Jason S Presnell; Elizabeth Wirsching; Virginia M Weis
Journal:  PeerJ       Date:  2022-01-10       Impact factor: 2.984

Review 5.  The Tentacular Spectacular: Evolution of Regeneration in Sea Anemones.

Authors:  Chloé A van der Burg; Peter J Prentis
Journal:  Genes (Basel)       Date:  2021-07-14       Impact factor: 4.096

  5 in total

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