| Literature DB >> 32016141 |
Alexandra Schoeny1, Patrick Gognalons1.
Abstract
This article displays insect count data obtained in eleven field trials conducted between 2010 and 2019 in southeastern France. Winged insect abundances were monitored daily within melon crops during 8-11 weeks in May-July using a suction trap or a yellow pan trap. Aphids were identified under a stereomicroscope. In total, 29,709 winged aphids belonging to 216 taxa and 151,061 other flying insects were caught. Among possible uses, these data can populate larger multisite studies or larger time series investigating aphid community variations. They can also feed generic studies exploring temporal dependencies or species assemblages. They can stimulate new collaborations with entomologists keen on implementing molecular tools or taxonomic expertise on a large specimen collection.Entities:
Keywords: Aphid communities; Biodiversity; Insect sampling; Species composition and population dynamic; Suction trap; Taxonomic identification; Temporal pattern of flight activity; Yellow pan trap
Year: 2020 PMID: 32016141 PMCID: PMC6992952 DOI: 10.1016/j.dib.2020.105132
Source DB: PubMed Journal: Data Brief ISSN: 2352-3409
Melon crop details for field trials conducted in Avignon between 2010 and 2019.
| Trial code | Experimental site | Planting date | Trial area (m2) | Number of plants | Number of rows | Number of plants per row | Row spacing (m) | Plant spacing (m) |
|---|---|---|---|---|---|---|---|---|
| M10 | St Paul | 28/05/2010 | 256 | 160 | 8 | 20 | 2 | 0.8 |
| V11 | St Paul | 09/05/2011 | 120 | 120 | 6 | 20 | 2 | 0.5 |
| V12 | St Paul | 11/05/2012 | 150 | 150 | 6 | 25 | 2 | 0.5 |
| V13 | St Paul | 06/05/2013 | 150 | 150 | 6 | 25 | 2 | 0.5 |
| P11 | St Paul | 24/05/2011 | 156 | 208 | 16 | 13 | 1.5 | 0.5 |
| P12 | St Paul | 31/05/2012 | 180 | 240 | 16 | 15 | 1.5 | 0.5 |
| P13 | St Paul | 24/05/2013 | 180 | 240 | 16 | 15 | 1.5 | 0.5 |
| P14 | St Paul | 27/05/2014 | 180 | 240 | 16 | 15 | 1.5 | 0.5 |
| P15 | St Paul | 28/05/2015 | 180 | 240 | 16 | 15 | 1.5 | 0.5 |
| M18 | St Maurice | 25/05/2018 | 120 | 160 | 8 | 20 | 1.5 | 0.5 |
| M19 | St Maurice | 28/05/2019 | 120 | 160 | 8 | 20 | 1.5 | 0.5 |
Agryl P17 fleece removal; fleece optimizes plant growth by increasing both air and soil temperatures and reducing wind damage.
List of aphid taxa recorded during the 2010–2019 monitoring and their corresponding INRA or Rothamsted Insect Survey (RIS) codes.
| Taxon name | Taxon code |
|---|---|
| RIS-755 | |
| RIS-381 | |
| RIS-382 | |
| RIS-389 | |
| RIS-392 | |
| RIS-1014 | |
| RIS-2065 | |
| RIS-468 | |
| RIS-480 | |
| RIS-1012 | |
| RIS-238 | |
| RIS-1015 | |
| RIS-239 | |
| INRA-001 | |
| RIS-1064 | |
| INRA-002 | |
| INRA-003 | |
| RIS-163 | |
| RIS-132 | |
| RIS-181 | |
| RIS-152 | |
| RIS-787 | |
| RIS-153 | |
| RIS-142 | |
| RIS-125 | |
| RIS-1005 | |
| RIS-197 | |
| RIS-530 | |
| RIS-793 | |
| RIS-260 | |
| RIS-59 | |
| RIS-376 | |
| RIS-377 | |
| RIS-531 | |
| RIS-84 | |
| RIS-241 | |
| RIS-243 | |
| RIS-747 | |
| RIS-253 | |
| RIS-745 | |
| RIS-254 | |
| RIS-1016 | |
| RIS-252 | |
| RIS-262 | |
| RIS-264 | |
| RIS-82 | |
| RIS-80 | |
| RIS-341 | |
| RIS-342 | |
| RIS-343 | |
| RIS-344 | |
| RIS-346 | |
| RIS-1018 | |
| RIS-292 | |
| RIS-293 | |
| RIS-1046 | |
| RIS-298 | |
| RIS-211 | |
| RIS-287 | |
| RIS-289 | |
| RIS-50 | |
| RIS-45 | |
| RIS-46 | |
| RIS-47 | |
| RIS-1002 | |
| RIS-61 | |
| RIS-1078 | |
| RIS-87 | |
| RIS-280 | |
| RIS-1020 | |
| RIS-281 | |
| RIS-403 | |
| RIS-340 | |
| RIS-77 | |
| RIS-1502 | |
| RIS-259 | |
| RIS-809 | |
| RIS-91 | |
| RIS-234 | |
| RIS-235 | |
| RIS-1006 | |
| RIS-284 | |
| RIS-497 | |
| RIS-1010 | |
| RIS-500 | |
| INRA-005 | |
| RIS-1518 | |
| RIS-70 | |
| RIS-768 | |
| RIS-88 | |
| RIS-527 | |
| RIS-532 | |
| RIS-1055 | |
| RIS-261 | |
| RIS-1022 | |
| RIS-772 | |
| RIS-808 | |
| RIS-271 | |
| RIS-1023 | |
| RIS-276 | |
| RIS-110 | |
| RIS-1065 | |
| RIS-358 | |
| RIS-359 | |
| RIS-360 | |
| RIS-362 | |
| RIS-1007 | |
| RIS-475 | |
| RIS-267 | |
| INRA-007 | |
| RIS-451 | |
| RIS-461 | |
| RIS-462 | |
| RIS-456 | |
| RIS-1027 | |
| RIS-732 | |
| RIS-410 | |
| RIS-416 | |
| RIS-1009 | |
| RIS-470 | |
| RIS-811 | |
| RIS-122 | |
| RIS-727 | |
| RIS-395 | |
| RIS-396 | |
| RIS-397 | |
| RIS-398 | |
| RIS-1008 | |
| RIS-2014 | |
| RIS-510 | |
| RIS-491 | |
| RIS-801 | |
| RIS-63 | |
| RIS-64 | |
| INRA-009 | |
| INRA-010 | |
| RIS-1003 | |
| RIS-1077 | |
| RIS-364 | |
| RIS-312 | |
| RIS-320 | |
| RIS-314 | |
| RIS-315 | |
| RIS-322 | |
| RIS-1030 | |
| RIS-740 | |
| RIS-354 | |
| RIS-355 | |
| RIS-1011 | |
| RIS-733 | |
| RIS-303 | |
| RIS-1025 | |
| RIS-525 | |
| RIS-1506 | |
| RIS-812 | |
| RIS-308 | |
| RIS-2003 | |
| RIS-350 | |
| RIS-275 | |
| RIS-75 | |
| RIS-401 | |
| RIS-309 | |
| RIS-367 | |
| RIS-111 | |
| RIS-112 | |
| RIS-113 | |
| RIS-114 | |
| RIS-2009 | |
| RIS-739 | |
| RIS-1045 | |
| RIS-116 | |
| RIS-115 | |
| RIS-750 | |
| RIS-121 | |
| RIS-728 | |
| RIS-1088 | |
| RIS-52 | |
| RIS-54 | |
| RIS-420 | |
| RIS-421 | |
| RIS-1031 | |
| RIS-526 | |
| RIS-273 | |
| RIS-738 | |
| INRA-012 | |
| RIS-72 | |
| RIS-73 | |
| RIS-74 | |
| RIS-2008 | |
| RIS-1037 | |
| RIS-503 | |
| RIS-490 | |
| RIS-1038 | |
| RIS-92 | |
| RIS-93 | |
| RIS-731 | |
| RIS-1039 | |
| RIS-94 | |
| RIS-795 | |
| RIS-797 | |
| RIS-1024 | |
| RIS-68 | |
| RIS-758 | |
| RIS-759 | |
| RIS-69 | |
| RIS-23 | |
| INRA-015 | |
| RIS-1504 | |
| INRA-013 | |
| INRA-014 | |
| RIS-763 | |
| RIS-439 | |
| RIS-751 | |
| RIS-782 | |
| RIS-1042 | |
| RIS-479 |
Summary of airborne insect monitoring in 11 field trials conducted in Avignon between 2010 and 2019.
| Dataset code | Trial code | Trapping method | Monitoring period (days) | Number of winged aphids | Number of other flying insects | Ratio aphids/total catch (%) | Number of aphid taxa identified | Number of aphids not assigned to a taxon |
|---|---|---|---|---|---|---|---|---|
| M10 | M10 | Suction | 64 | 3532 | 14 871 | 19 | 107 | 81 |
| V11 | V11 | Suction | 74 | 3128 | 16 423 | 16 | 92 | 13 |
| V12 | V12 | Suction | 66 | 4206 | 23 139 | 15 | 95 | 106 |
| V13 | V13 | Suction | 80 | 2998 | 13 488 | 18 | 99 | 17 |
| P11 | P11 | Suction | 65 | 3306 | 17 924 | 16 | 91 | 19 |
| P12 | P12 | Suction | 56 | 3602 | 11 499 | 24 | 75 | 57 |
| P13 | P13 | Suction | 62 | 1848 | 7571 | 20 | 80 | 5 |
| P14 | P14 | Suction | 59 | 1457 | 9346 | 13 | 62 | 7 |
| P15 | P15 | Suction | 56 | 2245 | 7825 | 22 | 51 | 18 |
| P15Y | P15 | Yellow pan | 56 | 518 | 1169 | 31 | 35 | 8 |
| M18 | M18 | Suction | 55 | 786 | 15 660 | 5 | 81 | 4 |
| M18Y | M18 | Yellow pan | 55 | 431 | 2132 | 17 | 49 | 5 |
| M19 | M19 | Suction | 58 | 835 | 8476 | 9 | 76 | 6 |
| M19Y | M19 | Yellow pan | 58 | 817 | 1538 | 35 | 52 | 7 |
| MIN | 55 | 431 | 1169 | 5 | 35 | 4 | ||
| MAX | 80 | 4206 | 23 139 | 35 | 107 | 106 | ||
| TOTAL | 29 709 | 151 061 |
Aphids that could not be identified because of i) limit of taxonomic expertise, ii) loss during storage, or iii) damage during trapping.
Fig. 1Suction trap used to monitor winged insects in eleven field trials conducted in Avignon between 2010 and 2019. (A) In situ in a melon crop (Photo credit: Alexandra Schoeny, INRAE) (B) Schematic representation of a suction trap adapted from Pascal et al., 2013 [2] showing its operating principle and its different parts: ➊ vacuum chamber, ➋ air extractor, ➌ insect collector, ➍ collecting pot, ➎ chimney rain cap.
Fig. 2Yellow pan trap used to monitor winged insects in three of the eleven field trials conducted in Avignon between 2010 and 2019 (Photo credit: Alexandra Schoeny, INRAE).
Specifications Table
| Subject | Agricultural and Biological Sciences |
| Specific subject area | Entomology |
| Type of data | Tables and figures |
| How data were acquired | Winged aphids were identified under a stereomicroscope using taxonomic keys. |
| Data format | Raw and summarized |
| Parameters for data collection | Eleven field experiments were conducted between 2010 and 2019. Winged insects were monitored daily within melon crops during 8–11 weeks in May–July. |
| Description of data collection | Winged insects were sampled at the crop height with a suction trap placed in the crop. For three of the trials, an additional sampling was carried out with a yellow pan trap. Both types of catches were collected daily, rinsed and stored in 70% ethanol until sorting (aphids vs other insects) and taxonomic identification of aphids under a stereomicroscope. |
| Data source location | INRAE St Paul experimental station, Avignon, France |
| Data accessibility | Summarized data are hosted with the article. |
These daily abundances are useful to characterize and compare the temporal patterns of 206 aphid taxa visiting melon plants cultivated in one geographical area (Avignon) during eight cropping seasons. These data can benefit other scientists keen to add Avignon datasets in a multisite analysis focusing on a particular aphid taxon or interested in species richness and diversity. They can also populate larger time series investigating community assemblage variations in a context of climate change for instance. The data can feed generic studies exploring temporal dependencies or species assemblages. The data can be useful to compare different insect trapping methods and could stimulate other teams to develop the suction trap described in this paper. Most data correspond to stored specimens that could be shared with entomologists interested in the taxonomic identification of non-aphid taxa, or the implementation of molecular tools to genotype a given taxon or identify a particular gene (insecticide resistance for instance). |