Literature DB >> 32006128

Screening of Biomarkers Related to Ovarian Maturation and Spawning in Blunt Snout Bream (Megalobrama amblycephala) Based on Metabolomics and Transcriptomics.

Shaokui Yi1,2, Li-Fang Liu1,2, Lai-Fang Zhou1,2, Bo-Wen Zhao1,2, Wei-Min Wang1,2, Ze-Xia Gao3,4,5.   

Abstract

In fish breeding practices, gamete maturity of females is vital to reproductive success. For some species, it is possible to estimate the female maturation status based on abdomen observation, but quite difficult for some species which mature at big size. To screen out the potential biomarker in fish blood relating to female maturation, we employed the approach integrating the UPLC-MS/MS and RNA-seq techniques to investigate the metabolites and genes reflecting the sexual maturation and spawning of female blunt snout bream Megalobrama amblycephala. The study included four groups, 1-year-old immature female individuals, 2-year-old immature female individuals, 2-year-old sexually mature female individuals, and 2-year-old sexually mature female individuals after 24 h of successful spawning. The upregulated metabolites in mature females were involved in "steroid hormone biosynthesis," "metabolic pathways," "glycerophospholipid metabolism," etc. compared with those of immature individuals. As the key intermediate of steroid hormone biosynthesis, 17α-hydroxypregnenolone exhibited the highest level in 2-year-old mature females than in the immature females. Meanwhile, the metabolites (i.e., dodecanoic acid and myristic acid) participating in fatty acid synthesis exhibited much lower levels in the females after spawning than those before spawning. In addition to the metabolites, the genes involved in ovarian steroidogenesis were significantly upregulated in the 2-year-old immature females compared to the 1-year-old immature females, indicating that the ovarian steroidogenesis plays important roles in ovarian development of M. amblycephala at the early stages. The significant upregulation of genes (i.e., itpr1, camk2, and mekk2) involved in the "GnRH signaling pathway" was observed in the mature females compared with the immature females, which indicated that the estrogen levels increased after female maturation in M. amblycephala. Moreover, many genes (e.g., gck, creb1, tf2-9, ryr2, asgr1, and creb1) regulating insulin secretion and thyroid hormone synthesis were significantly downregulated after female spawning. The dynamics of gene expression and metabolites observed in this study provide novel cues for guiding fish practical artificial reproduction.

Entities:  

Keywords:  Biomarker; Female maturation; Megalobrama amblycephala; Metabolomics; Transcriptomics

Mesh:

Substances:

Year:  2020        PMID: 32006128     DOI: 10.1007/s10126-019-09943-5

Source DB:  PubMed          Journal:  Mar Biotechnol (NY)        ISSN: 1436-2228            Impact factor:   3.619


  36 in total

1.  Fast gapped-read alignment with Bowtie 2.

Authors:  Ben Langmead; Steven L Salzberg
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2.  Steroid and thyroid hormones during sexual maturation of coho salmon (Oncorhynchus kisutch) in seawater of fresh water.

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Authors:  Manfred G Grabherr; Brian J Haas; Moran Yassour; Joshua Z Levin; Dawn A Thompson; Ido Amit; Xian Adiconis; Lin Fan; Raktima Raychowdhury; Qiandong Zeng; Zehua Chen; Evan Mauceli; Nir Hacohen; Andreas Gnirke; Nicholas Rhind; Federica di Palma; Bruce W Birren; Chad Nusbaum; Kerstin Lindblad-Toh; Nir Friedman; Aviv Regev
Journal:  Nat Biotechnol       Date:  2011-05-15       Impact factor: 54.908

8.  Determination of quantitative trait loci (QTL) for early maturation in rainbow trout (Oncorhynchus mykiss).

Authors:  Lisa Haidle; Jennifer E Janssen; Karim Gharbi; Hooman K Moghadam; Moira M Ferguson; Roy G Danzmann
Journal:  Mar Biotechnol (NY)       Date:  2008-05-20       Impact factor: 3.727

9.  Detection of quantitative trait loci (QTL) related to grilsing and late sexual maturation in Atlantic salmon (Salmo salar).

Authors:  Alejandro P Gutierrez; Krzysztof P Lubieniecki; Steve Fukui; Ruth E Withler; Bruce Swift; William S Davidson
Journal:  Mar Biotechnol (NY)       Date:  2013-08-04       Impact factor: 3.619

10.  Deep sexual dimorphism in adult medaka fish liver highlighted by multi-omic approach.

Authors:  Qin Qiao; Séverine Le Manach; Benoit Sotton; Hélène Huet; Evelyne Duvernois-Berthet; Alain Paris; Charlotte Duval; Loïc Ponger; Arul Marie; Alain Blond; Lucrèce Mathéron; Joelle Vinh; Gérard Bolbach; Chakib Djediat; Cécile Bernard; Marc Edery; Benjamin Marie
Journal:  Sci Rep       Date:  2016-08-26       Impact factor: 4.379

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