Literature DB >> 31996842

Facilitating chemical and biochemical experiments with electronic microcontrollers and single-board computers.

Gurpur Rakesh D Prabhu1,2, Tzu-Hsien Yang1,2, Chun-Yao Hsu1, Chun-Pei Shih1, Chun-Ming Chang1,2, Pei-Han Liao1,2, Hsiang-Ting Ni1, Pawel L Urban3,4.   

Abstract

Since the advent of modern science, researchers have had to rely on their technical skills or the support of specialized workshops to construct analytical instruments. The notion of the 'fourth industrial revolution' promotes construction of customized systems by individuals using widely available, inexpensive electronic modules. This protocol shows how chemists and biochemists can utilize a broad range of microcontroller boards (MCBs) and single-board computers (SBCs) to improve experimental designs and address scientific questions. We provide seven example procedures for laboratory routines that can be expedited by implementing this technology: (i) injection of microliter-volume liquid plugs into microscale capillaries for low-volume assays; (ii) transfer of liquid extract to a mass spectrometer; (iii) liquid-gas extraction of volatile organic compounds (called 'fizzy extraction'), followed by mass spectrometric detection; (iv) monitoring of experimental conditions over the Internet cloud in real time; (v) transfer of analytes to a mass spectrometer via a liquid microjunction interface, data acquisition, and data deposition into the Internet cloud; (vi) feedback control of a biochemical reaction; and (vii) optimization of sample flow rate in direct-infusion mass spectrometry. The protocol constitutes a primer for chemists and biochemists who would like to take advantage of MCBs and SBCs in daily experimentation. It is assumed that the readers have not attended any courses related to electronics or programming. Using the instructions provided in this protocol and the cited material, readers should be able to assemble simple systems to facilitate various procedures performed in chemical and biochemical laboratories in 1-2 d.

Mesh:

Year:  2020        PMID: 31996842     DOI: 10.1038/s41596-019-0272-1

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  21 in total

1.  Nanospray desorption electrospray ionization: an ambient method for liquid-extraction surface sampling in mass spectrometry.

Authors:  Patrick J Roach; Julia Laskin; Alexander Laskin
Journal:  Analyst       Date:  2010-06-30       Impact factor: 4.616

2.  Versatile new ion source for the analysis of materials in open air under ambient conditions.

Authors:  Robert B Cody; James A Laramée; H Dupont Durst
Journal:  Anal Chem       Date:  2005-04-15       Impact factor: 6.986

3.  Universal electronics for miniature and automated chemical assays.

Authors:  Pawel L Urban
Journal:  Analyst       Date:  2015-02-21       Impact factor: 4.616

4.  A compact 3D-printed interface for coupling open digital microchips with Venturi easy ambient sonic-spray ionization mass spectrometry.

Authors:  Jie-Bi Hu; Ting-Ru Chen; Chia-Hsien Chang; Ji-Yen Cheng; Yu-Chie Chen; Pawel L Urban
Journal:  Analyst       Date:  2015-01-27       Impact factor: 4.616

5.  Organic synthesis in a modular robotic system driven by a chemical programming language.

Authors:  Sebastian Steiner; Jakob Wolf; Stefan Glatzel; Anna Andreou; Jarosław M Granda; Graham Keenan; Trevor Hinkley; Gerardo Aragon-Camarasa; Philip J Kitson; Davide Angelone; Leroy Cronin
Journal:  Science       Date:  2018-11-29       Impact factor: 47.728

6.  Mass spectrometry sampling under ambient conditions with desorption electrospray ionization.

Authors:  Zoltán Takáts; Justin M Wiseman; Bogdan Gologan; R Graham Cooks
Journal:  Science       Date:  2004-10-15       Impact factor: 47.728

7.  Application of a liquid extraction based sealing surface sampling probe for mass spectrometric analysis of dried blood spots and mouse whole-body thin tissue sections.

Authors:  Gary J Van Berkel; Vilmos Kertesz
Journal:  Anal Chem       Date:  2009-11-01       Impact factor: 6.986

8.  Microcontroller-assisted compensation of adenosine triphosphate levels: instrument and method development.

Authors:  Jie-Bi Hu; Ting-Ru Chen; Yu-Chie Chen; Pawel L Urban
Journal:  Sci Rep       Date:  2015-01-30       Impact factor: 4.379

9.  Automation of fizzy extraction enabled by inexpensive open-source modules.

Authors:  Hao-Chun Yang; Chun-Ming Chang; Pawel L Urban
Journal:  Heliyon       Date:  2019-05-14

10.  Networking chemical robots for reaction multitasking.

Authors:  Dario Caramelli; Daniel Salley; Alon Henson; Gerardo Aragon Camarasa; Salah Sharabi; Graham Keenan; Leroy Cronin
Journal:  Nat Commun       Date:  2018-08-24       Impact factor: 14.919

View more
  3 in total

1.  Telechemistry 2.0: Remote monitoring of fluorescent chemical reactions.

Authors:  Chun-Yao Hsu; Gurpur Rakesh D Prabhu; Pawel L Urban
Journal:  HardwareX       Date:  2021-10-30

Review 2.  Low-cost and open-source strategies for chemical separations.

Authors:  Joshua J Davis; Samuel W Foster; James P Grinias
Journal:  J Chromatogr A       Date:  2020-12-24       Impact factor: 4.759

3.  Development of an Automatable Affinity Purification Process for DNA-Encoded Chemistry.

Authors:  Katharina Götte; Robin Dinter; Leon Justen; Norbert Kockmann; Andreas Brunschweiger
Journal:  ACS Omega       Date:  2022-08-02
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.