Literature DB >> 31993923

Multiscale relevance and informative encoding in neuronal spike trains.

Ryan John Cubero1,2,3,4, Matteo Marsili5,6, Yasser Roudi7.   

Abstract

Neuronal responses to complex stimuli and tasks can encompass a wide range of time scales. Understanding these responses requires measures that characterize how the information on these response patterns are represented across multiple temporal resolutions. In this paper we propose a metric - which we call multiscale relevance (MSR) - to capture the dynamical variability of the activity of single neurons across different time scales. The MSR is a non-parametric, fully featureless indicator in that it uses only the time stamps of the firing activity without resorting to any a priori covariate or invoking any specific structure in the tuning curve for neural activity. When applied to neural data from the mEC and from the ADn and PoS regions of freely-behaving rodents, we found that neurons having low MSR tend to have low mutual information and low firing sparsity across the correlates that are believed to be encoded by the region of the brain where the recordings were made. In addition, neurons with high MSR contain significant information on spatial navigation and allow to decode spatial position or head direction as efficiently as those neurons whose firing activity has high mutual information with the covariate to be decoded and significantly better than the set of neurons with high local variations in their interspike intervals. Given these results, we propose that the MSR can be used as a measure to rank and select neurons for their information content without the need to appeal to any a priori covariate.

Entities:  

Keywords:  Bayesian decoding; Information theory; Multiple time scale analysis; Spike train data; Time series analysis

Mesh:

Year:  2020        PMID: 31993923      PMCID: PMC7035307          DOI: 10.1007/s10827-020-00740-x

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  39 in total

1.  Conjunctive representation of position, direction, and velocity in entorhinal cortex.

Authors:  Francesca Sargolini; Marianne Fyhn; Torkel Hafting; Bruce L McNaughton; Menno P Witter; May-Britt Moser; Edvard I Moser
Journal:  Science       Date:  2006-05-05       Impact factor: 47.728

2.  Efficient coding in heterogeneous neuronal populations.

Authors:  Mircea I Chelaru; Valentin Dragoi
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-14       Impact factor: 11.205

Review 3.  Sensory neural codes using multiplexed temporal scales.

Authors:  Stefano Panzeri; Nicolas Brunel; Nikos K Logothetis; Christoph Kayser
Journal:  Trends Neurosci       Date:  2010-01-04       Impact factor: 13.837

4.  Theta phase precession in hippocampal neuronal populations and the compression of temporal sequences.

Authors:  W E Skaggs; B L McNaughton; M A Wilson; C A Barnes
Journal:  Hippocampus       Date:  1996       Impact factor: 3.899

5.  Interpreting neuronal population activity by reconstruction: unified framework with application to hippocampal place cells.

Authors:  K Zhang; I Ginzburg; B L McNaughton; T J Sejnowski
Journal:  J Neurophysiol       Date:  1998-02       Impact factor: 2.714

6.  Speed cells in the medial entorhinal cortex.

Authors:  Emilio Kropff; James E Carmichael; May-Britt Moser; Edvard I Moser
Journal:  Nature       Date:  2015-07-15       Impact factor: 49.962

7.  The hippocampus as a spatial map. Preliminary evidence from unit activity in the freely-moving rat.

Authors:  J O'Keefe; J Dostrovsky
Journal:  Brain Res       Date:  1971-11       Impact factor: 3.252

8.  Spatial correlates of firing patterns of single cells in the subiculum of the freely moving rat.

Authors:  P E Sharp; C Green
Journal:  J Neurosci       Date:  1994-04       Impact factor: 6.167

9.  Spike-timing-dependent ensemble encoding by non-classically responsive cortical neurons.

Authors:  Michele N Insanally; Ioana Carcea; Rachel E Field; Chris C Rodgers; Brian DePasquale; Kanaka Rajan; Michael R DeWeese; Badr F Albanna; Robert C Froemke
Journal:  Elife       Date:  2019-01-28       Impact factor: 8.140

10.  Collective Behavior of Place and Non-place Neurons in the Hippocampal Network.

Authors:  Leenoy Meshulam; Jeffrey L Gauthier; Carlos D Brody; David W Tank; William Bialek
Journal:  Neuron       Date:  2017-11-16       Impact factor: 17.173

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  1 in total

1.  A Time-Varying Information Measure for Tracking Dynamics of Neural Codes in a Neural Ensemble.

Authors:  Mohammad R Rezaei; Milos R Popovic; Milad Lankarany
Journal:  Entropy (Basel)       Date:  2020-08-11       Impact factor: 2.524

  1 in total

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