| Literature DB >> 31991795 |
Enid Owusu1, Mercy Jemima Newman2.
Abstract
(1) Background: Present methods for drug susceptibility tests (DST) rely on culture methods that are sophisticated and relatively faster, or a slow and cheaper option. These methods frustrate disease control; therefore, there is a need for methods that incorporate key functions of microscopy and culture, with reduced cost burden and sophistry. Thus, the purpose of this study was to identify which, among the most commonly used (in Ghana) methods, can conveniently be used at health centers located in rural areas for effective DST determination of Mycobacterium tuberculosis (MTB). (2)Entities:
Keywords: MODS; Mycobacterium tuberculosis; susceptibility; tuberculosis
Year: 2020 PMID: 31991795 PMCID: PMC7151611 DOI: 10.3390/medsci8010005
Source DB: PubMed Journal: Med Sci (Basel) ISSN: 2076-3271
Time taken (in days) for culture and susceptibility testing.
| Culture and Susceptibility Testing (MGIT, Direct and Indirect MODS) | |||||||
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| MGIT Culture, | MGIT SIRE, | MGIT PZA, | MGIT Susceptibility, | Dir. MODS SIRE, | In. MODS SIRE, | MODS PZA, | |
| Maximum | 40 | 21 | 21 | 63 | 32 | 16 | 16 |
| Minimum | 3 | 5 | 5 | 10 | 7 | 6 | 7 |
| Average | 10.1 | 9.6 | 9.0 | 21.7 | 12.5 | 9.3 | 9 |
| Indeterminate | 13 | 36 | 4 | NA | 0 | 0 | 0 |
N = Total number of MTB isolates tested; SIRE-streptomycin, isoniazid, rifampicin, ethambutol; PZA-pyrazinamide; In. MODS-Indirect MODS; Dir MODS-Direct MODS; Indeterminate represents samples that the MGIT instrument flagged as positive but in which no AFB was seen in their smears; thus, a possible contamination of culture was considered to have occurred, or growth was detected in only one control well for MODS-DST. Tests and controls were arranged in the BACTEC MGIT 960 instrument for a 14-day incubation period. MGIT susceptibility represents the turnaround time for the BACTEC MGIT 960 procedure (from culture through drug susceptibility testing). As part of the MGIT test protocol, about two days on average elapsed between the day the instrument flagged positive and the day the susceptibility was set.
Resistance pattern of the antimicrobials and sensitivity, specificity, and predictive values.
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| Resistant, | 52 (19.6) | 65 (24.5) | 19 (7.2) | 11 (4.2) | 5 (7.6) |
| Susceptible, | 177 (66.8) | 164 (61.9) | 210 (79.2) | 218 (82.3) | 57 (86.4) |
| Indeterminate, | 36(13.6) | 36 (13.6) | 36 (13.6) | 36 (13.6) | 4 (6.0) |
| Sensitivity (%) | 81.3 | 82.3 | 79.2 | 57.9 | 100 |
| Specificity (%) | 100 | 97.6 | 91.3 | 99.1 | 100 |
| PPV (%) | 100 | 94.2 | 86.4 | 84.6 | 100 |
| NPV (%) | 93.7 | 92.1 | 97.7 | 94.5 | 100 |
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| Resistant, | 79(27.9) | 79(27.9) | 23(8.1) | 23(8.1) | 4(6.1) |
| Susceptible, | 204 (72.1) | 193 (68.2) | 260 (91.9) | 260 (91.9) | 62 (93.9) |
| Indeterminate, | 0 | 0 | 0 | 0 | 0 |
| Sensitivity (%) | 100 | 95.7 | 85.2 | 85.2 | 100 |
| Specificity (%) | 94 | 93.2 | 97.4 | 97 | 100 |
| PPV (%) | 91 | 86.5 | 76.7 | 74.2 | 100 |
| NPV (%) | 100 | 98.0 | 98.5 | 99.2 | 100 |
N = Total number of MTB isolates tested; SIRE-streptomycin, isoniazid, rifampicin, ethambutol; PZA-pyrazinamide; PZA-Pyrazinamide; PPV denotes a positive predictive value and NPV a negative predictive value of the n-number of samples that were observed to be resistant, susceptible, or indeterminate.
Concordance and discordance of the MODS (direct and indirect) and BACTEC MGIT 960 methods.
| Antimicrobials | |||||
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| Rifampin | Streptomycin | Isoniazid | Ethambutol | Pyrazinamide | |
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| 90 | 87 | 79 | 63 | 100 |
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| 10 | 13 | 21 | 37 | 0 |