Literature DB >> 31988827

Association mapping for mungbean yellow mosaic India virus resistance in mungbean (Vigna radiata L. Wilczek).

Chandra Mohan Singh1,2, Aditya Pratap1, Sanjeev Gupta1, Revanappa S Biradar3, Narendra Pratap Singh1.   

Abstract

The present study aimed to detect the marker-trait association of a selected diverse panel of 127 mungbean genotypes against mungbean yellow mosaic India virus (MYMIV). Virus-specific primers pairs viz., AC-abut/AV-abut and BC-abut/BV-abut confirmed the involvement of MYMIV in yellow mosaic disease development and the same was validated through restriction digestion analysis. 256 genome-wide microsatellite markers were screened on a test panel in which 93 polymorphic markers were used in association studies. Population structure analysis led to formation of six distinct subpopulations. 1097 alleles were detected among 127 test genotypes whereas number of alleles ranged 2-22 and PIC values ranged 0.27-0.92%, indicating ample amount of variation at genome level. 15 microsatellite markers were detected as associated with MYMIV resistance, among them three microsatellites explained 11-14% phenotypic variation. The specific regions close to CEDG293, DMB-SSR008 and DMB-SSR059 associated with MYMIV resistance were detected, located on linkage group 2, 4 and 9 and may prove useful in marker-assisted mungbean improvement programme for enhancing MYMIV resistance. © King Abdulaziz City for Science and Technology 2020.

Entities:  

Keywords:  MYMIV; Marker-trait association; Simple sequence repeats; Vigna radiata; YMD

Year:  2020        PMID: 31988827      PMCID: PMC6946765          DOI: 10.1007/s13205-019-2035-7

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.406


  24 in total

1.  Inference of population structure using multilocus genotype data.

Authors:  J K Pritchard; M Stephens; P Donnelly
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2.  Evidence for a large-scale population structure among accessions of Arabidopsis thaliana: possible causes and consequences for the distribution of linkage disequilibrium.

Authors:  Marie-France Ostrowski; Jacques David; Sylvain Santoni; Heather McKhann; Xavier Reboud; Valerie Le Corre; Christine Camilleri; Dominique Brunel; David Bouchez; Benoit Faure; Thomas Bataillon
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3.  PowerMarker: an integrated analysis environment for genetic marker analysis.

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4.  Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study.

Authors:  G Evanno; S Regnaut; J Goudet
Journal:  Mol Ecol       Date:  2005-07       Impact factor: 6.185

5.  A general population-genetic model for the production by population structure of spurious genotype-phenotype associations in discrete, admixed or spatially distributed populations.

Authors:  Noah A Rosenberg; Magnus Nordborg
Journal:  Genetics       Date:  2006-04-02       Impact factor: 4.562

Review 6.  Quantitative trait loci from identification to exploitation for crop improvement.

Authors:  Jitendra Kumar; Debjyoti Sen Gupta; Sunanda Gupta; Sonali Dubey; Priyanka Gupta; Shiv Kumar
Journal:  Plant Cell Rep       Date:  2017-03-28       Impact factor: 4.570

7.  Association of functional markers with flowering time in lentil.

Authors:  Jitendra Kumar; Sunanda Gupta; Revanappa S Biradar; Priyanka Gupta; Sonali Dubey; Narendra Pratap Singh
Journal:  J Appl Genet       Date:  2017-12-11       Impact factor: 3.240

8.  Genome sequence of mungbean and insights into evolution within Vigna species.

Authors:  Yang Jae Kang; Sue K Kim; Moon Young Kim; Puji Lestari; Kil Hyun Kim; Bo-Keun Ha; Tae Hwan Jun; Won Joo Hwang; Taeyoung Lee; Jayern Lee; Sangrea Shim; Min Young Yoon; Young Eun Jang; Kwang Soo Han; Puntaree Taeprayoon; Na Yoon; Prakit Somta; Patcharin Tanya; Kwang Soo Kim; Jae-Gyun Gwag; Jung-Kyung Moon; Yeong-Ho Lee; Beom-Seok Park; Aureliano Bombarely; Jeffrey J Doyle; Scott A Jackson; Roland Schafleitner; Peerasak Srinives; Rajeev K Varshney; Suk-Ha Lee
Journal:  Nat Commun       Date:  2014-11-11       Impact factor: 14.919

9.  Detection of genome donor species of neglected tetraploid crop Vigna reflexo-pilosa (créole bean), and genetic structure of diploid species based on newly developed EST-SSR markers from azuki bean (Vigna angularis).

Authors:  Sompong Chankaew; Takehisa Isemura; Sachiko Isobe; Akito Kaga; Norihiko Tomooka; Prakit Somta; Hideki Hirakawa; Kenta Shirasawa; Duncan A Vaughan; Peerasak Srinives
Journal:  PLoS One       Date:  2014-08-25       Impact factor: 3.240

10.  Association mapping for important agronomic traits in core collection of rice (Oryza sativa L.) with SSR markers.

Authors:  Peng Zhang; Xiangdong Liu; Hanhua Tong; Yonggen Lu; Jinquan Li
Journal:  PLoS One       Date:  2014-10-31       Impact factor: 3.240

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  3 in total

1.  The impact of insecticides and plant extracts on the suppression of insect vector (Bemisia tabaci) of Mungbean yellow mosaic virus (MYMV).

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Journal:  PLoS One       Date:  2021-09-16       Impact factor: 3.752

2.  Comparative RNA-Seq analysis unfolds a complex regulatory network imparting yellow mosaic disease resistance in mungbean [Vigna radiata (L.) R. Wilczek].

Authors:  Uttarayan Dasgupta; Gyan Prakash Mishra; Harsh K Dikshit; Dwijesh C Mishra; Tejas Bosamia; Anirban Roy; Jyotika Bhati; Muraleedhar Aski; Ranjeet R Kumar; Amit Kumar Singh; Atul Kumar; Subodh K Sinha; Shiksha Chaurasia; Shelly Praveen; Ramakrishnan M Nair
Journal:  PLoS One       Date:  2021-01-12       Impact factor: 3.240

3.  Association Mapping for Yield Attributing Traits and Yellow Mosaic Disease Resistance in Mung Bean [Vigna radiata (L.) Wilczek].

Authors:  Versha Rohilla; Rajesh Kumar Yadav; Atman Poonia; Ravika Sheoran; Gita Kumari; P S Shanmugavadivel; Aditya Pratap
Journal:  Front Plant Sci       Date:  2022-01-17       Impact factor: 5.753

  3 in total

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