Literature DB >> 31986056

Enhanced Diffusion and Chemotaxis of Enzymes.

Mudong Feng1, Michael K Gilson1,2.   

Abstract

Many enzymes appear to diffuse faster in the presence of substrate and to drift either up or down a concentration gradient of their substrate. Observations of these phenomena, termed enhanced enzyme diffusion (EED) and enzyme chemotaxis, respectively, lead to a novel view of enzymes as active matter. Enzyme chemotaxis and EED may be important in biology and could have practical applications in biotechnology and nanotechnology. They are also of considerable biophysical interest; indeed, their physical mechanisms are still quite uncertain. This review provides an analytic summary of experimental studies of these phenomena and of the mechanisms that have been proposed to explain them and offers a perspective on future directions for the field.

Keywords:  FCS; Fokker-Planck equation; aldolase; catalase; fluorescence correlation spectroscopy; microfluidics; urease

Mesh:

Substances:

Year:  2020        PMID: 31986056     DOI: 10.1146/annurev-biophys-121219-081535

Source DB:  PubMed          Journal:  Annu Rev Biophys        ISSN: 1936-122X            Impact factor:   12.981


  9 in total

1.  Displacement Statistics of Unhindered Single Molecules Show no Enhanced Diffusion in Enzymatic Reactions.

Authors:  Alexander A Choi; Ha H Park; Kun Chen; Rui Yan; Wan Li; Ke Xu
Journal:  J Am Chem Soc       Date:  2022-03-08       Impact factor: 15.419

2.  A thermodynamic perspective on enhanced enzyme diffusion.

Authors:  Steve Pressé
Journal:  Proc Natl Acad Sci U S A       Date:  2020-12-09       Impact factor: 12.779

3.  Master curve of boosted diffusion for 10 catalytic enzymes.

Authors:  Ah-Young Jee; Tsvi Tlusty; Steve Granick
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-09       Impact factor: 11.205

4.  Driving forces in the origins of life.

Authors:  K A Dill; L Agozzino
Journal:  Open Biol       Date:  2021-02-03       Impact factor: 6.411

5.  Nanoscale Catalyst Chemotaxis Can Drive the Assembly of Functional Pathways.

Authors:  Charles Kocher; Luca Agozzino; Ken Dill
Journal:  J Phys Chem B       Date:  2021-07-29       Impact factor: 3.466

Review 6.  Perspective: a stirring role for metabolism in cells.

Authors:  José Losa; Simeon Leupold; Diego Alonso-Martinez; Petteri Vainikka; Sebastian Thallmair; Katarzyna M Tych; Siewert J Marrink; Matthias Heinemann
Journal:  Mol Syst Biol       Date:  2022-04       Impact factor: 11.429

7.  Enzyme Purification Improves the Enzyme Loading, Self-Propulsion, and Endurance Performance of Micromotors.

Authors:  Morgane Valles; Sílvia Pujals; Lorenzo Albertazzi; Samuel Sánchez
Journal:  ACS Nano       Date:  2022-03-28       Impact factor: 18.027

8.  Perpetuating enzymatically induced spatiotemporal pH and catalytic heterogeneity of a hydrogel by nanoparticles.

Authors:  Rishi Ram Mahato; Ekta Shandilya; Subhabrata Maiti
Journal:  Chem Sci       Date:  2022-06-23       Impact factor: 9.969

9.  Non-equilibrium phase separation in mixtures of catalytically active particles: size dispersity and screening effects.

Authors:  Vincent Ouazan-Reboul; Jaime Agudo-Canalejo; Ramin Golestanian
Journal:  Eur Phys J E Soft Matter       Date:  2021-09-03       Impact factor: 1.890

  9 in total

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