Literature DB >> 31982409

Identification of Lineage-Specific Transcription Factors That Prevent Activation of Hepatic Stellate Cells and Promote Fibrosis Resolution.

Xiao Liu1, Jun Xu1, Sara Rosenthal2, Ling-Juan Zhang3, Ryan McCubbin4, Nairika Meshgin4, Linshan Shang5, Yukinori Koyama1, Hsiao-Yen Ma4, Sonia Sharma6, Sven Heinz4, Chris K Glass7, Chris Benner4, David A Brenner4, Tatiana Kisseleva8.   

Abstract

BACKGROUND & AIMS: Development of liver fibrosis is associated with activation of quiescent hepatic stellate cells (HSCs) into collagen type I-producing myofibroblasts (activated HSCs). Cessation of liver injury often results in fibrosis resolution and inactivation of activated HSCs/myofibroblasts into a quiescent-like state (inactivated HSCs). We aimed to identify molecular features of phenotypes of HSCs from mice and humans.
METHODS: We performed studies with LratCre, Ets1-floxed, Nf1-floxed, Pparγ-floxed, Gata6-floxed, Rag2-/-γc-/-, and C57/Bl6 (control) mice. Some mice were given carbon tetrachloride (CCl4) to induce liver fibrosis, with or without a peroxisome proliferator-activated receptor-γ (PPARγ) agonist. Livers from mice were analyzed by immunohistochemistry. Quiescent, activated, and inactivated HSCs were isolated from livers of Col1α1YFP mice and analyzed by chromatin immunoprecipitation and sequencing. Human HSCs were isolated from livers denied for transplantation. We compared changes in gene expression patterns and epigenetic modifications (histone H3 lysine 4 dimethylation and histone H3 lysine 27 acetylation) in primary mouse and human HSCs. Transcription factors were knocked down with small hairpin RNAs in mouse HSCs.
RESULTS: Motif enrichment identified E26 transcription-specific transcription factors (ETS) 1, ETS2, GATA4, GATA6, interferon regulatory factor (IRF) 1, and IRF2 transcription factors as regulators of the mouse and human HSC lineage. Small hairpin RNA-knockdown of these transcription factors resulted in increased expression of genes that promote fibrogenesis and inflammation, and loss of HSC phenotype. Disruption of Gata6 or Ets1, or Nf1 or Pparγ (which are regulated by ETS1), increased the severity of CCl4-induced liver fibrosis in mice compared to control mice. Only mice with disruption of Gata6 or Pparγ had defects in fibrosis resolution after CCl4 administration was stopped, associated with persistent activation of HSCs. Administration of a PPARγ agonist accelerated regression of liver fibrosis after CCl4 administration in control mice but not in mice with disruption of Pparγ.
CONCLUSIONS: Phenotypes of HSCs from humans and mice are regulated by transcription factors, including ETS1, ETS2, GATA4, GATA6, IRF1, and IRF2. Activated mouse and human HSCs can revert to a quiescent-like, inactivated phenotype. We found GATA6 and PPARγ to be required for inactivation of human HSCs and regression of liver fibrosis in mice.
Copyright © 2020 AGA Institute. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Epigenetic Regulation; Inactivation of Fibrogenic Myofibroblasts; Lineage-Determining Transcription Factors; Resolution of Liver Fibrosis

Mesh:

Substances:

Year:  2020        PMID: 31982409      PMCID: PMC7252905          DOI: 10.1053/j.gastro.2020.01.027

Source DB:  PubMed          Journal:  Gastroenterology        ISSN: 0016-5085            Impact factor:   33.883


  34 in total

1.  Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome.

Authors:  Nathaniel D Heintzman; Rhona K Stuart; Gary Hon; Yutao Fu; Christina W Ching; R David Hawkins; Leah O Barrera; Sara Van Calcar; Chunxu Qu; Keith A Ching; Wei Wang; Zhiping Weng; Roland D Green; Gregory E Crawford; Bing Ren
Journal:  Nat Genet       Date:  2007-02-04       Impact factor: 38.330

2.  Neurofibromin plays a critical role in modulating osteoblast differentiation of mesenchymal stem/progenitor cells.

Authors:  Xiaohua Wu; Selina A Estwick; Shi Chen; Menggang Yu; Wenyu Ming; Todd D Nebesio; Yan Li; Jin Yuan; Reuben Kapur; David Ingram; Mervin C Yoder; Feng-Chun Yang
Journal:  Hum Mol Genet       Date:  2006-08-07       Impact factor: 6.150

3.  Ablation of NF1 function in neurons induces abnormal development of cerebral cortex and reactive gliosis in the brain.

Authors:  Y Zhu; M I Romero; P Ghosh; Z Ye; P Charnay; E J Rushing; J D Marth; L F Parada
Journal:  Genes Dev       Date:  2001-04-01       Impact factor: 11.361

4.  Adipogenic transcriptional regulation of hepatic stellate cells.

Authors:  Hongyun She; Shigang Xiong; Saswati Hazra; Hidekazu Tsukamoto
Journal:  J Biol Chem       Date:  2004-11-09       Impact factor: 5.157

5.  Identification of nucleotide preferences in DNA sequences recognised specifically by c-Ets-1 protein.

Authors:  D B Woods; J Ghysdael; M J Owen
Journal:  Nucleic Acids Res       Date:  1992-02-25       Impact factor: 16.971

6.  Mechanisms of spontaneous resolution of rat liver fibrosis. Hepatic stellate cell apoptosis and reduced hepatic expression of metalloproteinase inhibitors.

Authors:  J P Iredale; R C Benyon; J Pickering; M McCullen; M Northrop; S Pawley; C Hovell; M J Arthur
Journal:  J Clin Invest       Date:  1998-08-01       Impact factor: 14.808

7.  In Vivo Hepatic Reprogramming of Myofibroblasts with AAV Vectors as a Therapeutic Strategy for Liver Fibrosis.

Authors:  Milad Rezvani; Regina Español-Suñer; Yann Malato; Laure Dumont; Andrew A Grimm; Eike Kienle; Jay G Bindman; Ellen Wiedtke; Bernadette Y Hsu; Syed J Naqvi; Robert F Schwabe; Carlos U Corvera; Dirk Grimm; Holger Willenbring
Journal:  Cell Stem Cell       Date:  2016-06-02       Impact factor: 24.633

8.  Hepatic stellate cell transdifferentiation involves genome-wide remodeling of the DNA methylation landscape.

Authors:  Agata Page; Pier Paoli; Eva Moran Salvador; Steve White; Jeremy French; Jelena Mann
Journal:  J Hepatol       Date:  2015-11-26       Impact factor: 25.083

9.  Integrative analysis of 111 reference human epigenomes.

Authors:  Anshul Kundaje; Wouter Meuleman; Jason Ernst; Misha Bilenky; Angela Yen; Alireza Heravi-Moussavi; Pouya Kheradpour; Zhizhuo Zhang; Jianrong Wang; Michael J Ziller; Viren Amin; John W Whitaker; Matthew D Schultz; Lucas D Ward; Abhishek Sarkar; Gerald Quon; Richard S Sandstrom; Matthew L Eaton; Yi-Chieh Wu; Andreas R Pfenning; Xinchen Wang; Melina Claussnitzer; Yaping Liu; Cristian Coarfa; R Alan Harris; Noam Shoresh; Charles B Epstein; Elizabeta Gjoneska; Danny Leung; Wei Xie; R David Hawkins; Ryan Lister; Chibo Hong; Philippe Gascard; Andrew J Mungall; Richard Moore; Eric Chuah; Angela Tam; Theresa K Canfield; R Scott Hansen; Rajinder Kaul; Peter J Sabo; Mukul S Bansal; Annaick Carles; Jesse R Dixon; Kai-How Farh; Soheil Feizi; Rosa Karlic; Ah-Ram Kim; Ashwinikumar Kulkarni; Daofeng Li; Rebecca Lowdon; GiNell Elliott; Tim R Mercer; Shane J Neph; Vitor Onuchic; Paz Polak; Nisha Rajagopal; Pradipta Ray; Richard C Sallari; Kyle T Siebenthall; Nicholas A Sinnott-Armstrong; Michael Stevens; Robert E Thurman; Jie Wu; Bo Zhang; Xin Zhou; Arthur E Beaudet; Laurie A Boyer; Philip L De Jager; Peggy J Farnham; Susan J Fisher; David Haussler; Steven J M Jones; Wei Li; Marco A Marra; Michael T McManus; Shamil Sunyaev; James A Thomson; Thea D Tlsty; Li-Huei Tsai; Wei Wang; Robert A Waterland; Michael Q Zhang; Lisa H Chadwick; Bradley E Bernstein; Joseph F Costello; Joseph R Ecker; Martin Hirst; Alexander Meissner; Aleksandar Milosavljevic; Bing Ren; John A Stamatoyannopoulos; Ting Wang; Manolis Kellis
Journal:  Nature       Date:  2015-02-19       Impact factor: 69.504

10.  The ETS1 transcription factor is required for the development and cytokine-induced expansion of ILC2.

Authors:  Erin C Zook; Kevin Ramirez; Xiaohuan Guo; Grant van der Voort; Mikael Sigvardsson; Eric C Svensson; Yang-Xin Fu; Barbara L Kee
Journal:  J Exp Med       Date:  2016-04-11       Impact factor: 14.307

View more
  39 in total

Review 1.  Molecular and cellular mechanisms of liver fibrosis and its regression.

Authors:  Tatiana Kisseleva; David Brenner
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2020-10-30       Impact factor: 46.802

2.  Regulation of peroxisome proliferator-activated receptor-gamma activity affects the hepatic stellate cell activation and the progression of NASH via TGF-β1/Smad signaling pathway.

Authors:  Xi-Xi Ni; Xiao-Yun Li; Qi Wang; Jing Hua
Journal:  J Physiol Biochem       Date:  2020-11-14       Impact factor: 4.158

3.  ETS1 governs pathological tissue-remodeling programs in disease-associated fibroblasts.

Authors:  Minglu Yan; Noriko Komatsu; Ryunosuke Muro; Nam Cong-Nhat Huynh; Yoshihiko Tomofuji; Yukinori Okada; Hiroshi I Suzuki; Hiroyuki Takaba; Riko Kitazawa; Sohei Kitazawa; Warunee Pluemsakunthai; Yuichi Mitsui; Takashi Satoh; Tadashi Okamura; Takeshi Nitta; Sin-Hyeog Im; Chan Johng Kim; George Kollias; Sakae Tanaka; Kazuo Okamoto; Masayuki Tsukasaki; Hiroshi Takayanagi
Journal:  Nat Immunol       Date:  2022-08-23       Impact factor: 31.250

Review 4.  The Power of Plasticity-Metabolic Regulation of Hepatic Stellate Cells.

Authors:  Parth Trivedi; Shuang Wang; Scott L Friedman
Journal:  Cell Metab       Date:  2020-11-23       Impact factor: 27.287

5.  Heterogeneity of HSCs in a Mouse Model of NASH.

Authors:  Sara Brin Rosenthal; Xiao Liu; Souradipta Ganguly; Debanjan Dhar; Martina P Pasillas; Eugenia Ricciardelli; Rick Z Li; Ty D Troutman; Tatiana Kisseleva; Christopher K Glass; David A Brenner
Journal:  Hepatology       Date:  2021-08-10       Impact factor: 17.425

Review 6.  Fibrosis Regression After Eradication of Hepatitis C Virus: From Bench to Bedside.

Authors:  Don C Rockey; Scott L Friedman
Journal:  Gastroenterology       Date:  2021-01-30       Impact factor: 22.682

7.  Crocin inhibits the activation of mouse hepatic stellate cells via the lnc-LFAR1/MTF-1/GDNF pathway.

Authors:  Ji Xuan; Dongmei Zhu; Zhengyuan Cheng; Yuping Qiu; Mei Shao; Ya Yang; Qi Zhai; Fangyu Wang; Feng Qin
Journal:  Cell Cycle       Date:  2020-12-09       Impact factor: 4.534

8.  Spontaneous Lung Fibrosis Resolution Reveals Novel Antifibrotic Regulators.

Authors:  Qi Tan; Patrick A Link; Jeffrey A Meridew; Tho X Pham; Nunzia Caporarello; Giovanni Ligresti; Daniel J Tschumperlin
Journal:  Am J Respir Cell Mol Biol       Date:  2021-04       Impact factor: 6.914

Review 9.  The Agonists of Peroxisome Proliferator-Activated Receptor-γ for Liver Fibrosis.

Authors:  Jingjing Li; Chuanyong Guo; Jianye Wu
Journal:  Drug Des Devel Ther       Date:  2021-06-18       Impact factor: 4.162

10.  Nondegradable Collagen Increases Liver Fibrosis but Not Hepatocellular Carcinoma in Mice.

Authors:  Jacopo Baglieri; Cuili Zhang; Shuang Liang; Xiao Liu; Takahiro Nishio; Sara B Rosenthal; Debanjan Dhar; Hua Su; Min Cong; Jidong Jia; Mojgan Hosseini; Michael Karin; Tatiana Kisseleva; David A Brenner
Journal:  Am J Pathol       Date:  2021-06-11       Impact factor: 5.770

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.