Literature DB >> 31981779

Fidelity imposed network edit (FINE) for solving ill-posed image reconstruction.

Jinwei Zhang1, Zhe Liu1, Shun Zhang2, Hang Zhang3, Pascal Spincemaille2, Thanh D Nguyen2, Mert R Sabuncu4, Yi Wang5.   

Abstract

Deep learning (DL) is increasingly used to solve ill-posed inverse problems in medical imaging, such as reconstruction from noisy and/or incomplete data, as DL offers advantages over conventional methods that rely on explicit image features and hand engineered priors. However, supervised DL-based methods may achieve poor performance when the test data deviates from the training data, for example, when it has pathologies not encountered in the training data. Furthermore, DL-based image reconstructions do not always incorporate the underlying forward physical model, which may improve performance. Therefore, in this work we introduce a novel approach, called fidelity imposed network edit (FINE), which modifies the weights of a pre-trained reconstruction network for each case in the testing dataset. This is achieved by minimizing an unsupervised fidelity loss function that is based on the forward physical model. FINE is applied to two important inverse problems in neuroimaging: quantitative susceptibility mapping (QSM) and under-sampled image reconstruction in MRI. Our experiments demonstrate that FINE can improve reconstruction accuracy.
Copyright © 2020 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Data fidelity; Deep learning; Inverse problem; Quantitative susceptibility mapping; Under-sampled image reconstruction

Mesh:

Year:  2020        PMID: 31981779      PMCID: PMC7093048          DOI: 10.1016/j.neuroimage.2020.116579

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  41 in total

1.  General deming regression for estimating systematic bias and its confidence interval in method-comparison studies.

Authors:  R F Martin
Journal:  Clin Chem       Date:  2000-01       Impact factor: 8.327

2.  Quantitative susceptibility map reconstruction from MR phase data using bayesian regularization: validation and application to brain imaging.

Authors:  Ludovic de Rochefort; Tian Liu; Bryan Kressler; Jing Liu; Pascal Spincemaille; Vincent Lebon; Jianlin Wu; Yi Wang
Journal:  Magn Reson Med       Date:  2010-01       Impact factor: 4.668

3.  3D MR angiography of pulmonary arteries using real-time navigator gating and magnetization preparation.

Authors:  Y Wang; P J Rossman; R C Grimm; A H Wilman; S J Riederer; R L Ehman
Journal:  Magn Reson Med       Date:  1996-10       Impact factor: 4.668

4.  Simultaneous phase unwrapping and removal of chemical shift (SPURS) using graph cuts: application in quantitative susceptibility mapping.

Authors:  Jianwu Dong; Tian Liu; Feng Chen; Dong Zhou; Alexey Dimov; Ashish Raj; Qiang Cheng; Pascal Spincemaille; Yi Wang
Journal:  IEEE Trans Med Imaging       Date:  2014-10-08       Impact factor: 10.048

Review 5.  Deep learning.

Authors:  Yann LeCun; Yoshua Bengio; Geoffrey Hinton
Journal:  Nature       Date:  2015-05-28       Impact factor: 49.962

6.  Evaluation of iron content in human cerebral cavernous malformation using quantitative susceptibility mapping.

Authors:  Huan Tan; Tian Liu; Ying Wu; Jon Thacker; Robert Shenkar; Abdul Ghani Mikati; Changbin Shi; Conner Dykstra; Yi Wang; Pottumarthi V Prasad; Robert R Edelman; Issam A Awad
Journal:  Invest Radiol       Date:  2014-07       Impact factor: 6.016

7.  Effective motion-sensitizing magnetization preparation for black blood magnetic resonance imaging of the heart.

Authors:  Thanh D Nguyen; Ludovic de Rochefort; Pascal Spincemaille; Matthew D Cham; Jonathan W Weinsaft; Martin R Prince; Yi Wang
Journal:  J Magn Reson Imaging       Date:  2008-11       Impact factor: 4.813

8.  Deep Generative Adversarial Neural Networks for Compressive Sensing MRI.

Authors:  Morteza Mardani; Enhao Gong; Joseph Y Cheng; Shreyas S Vasanawala; Greg Zaharchuk; Lei Xing; John M Pauly
Journal:  IEEE Trans Med Imaging       Date:  2018-07-23       Impact factor: 10.048

9.  Quantitative susceptibility mapping: Report from the 2016 reconstruction challenge.

Authors:  Christian Langkammer; Ferdinand Schweser; Karin Shmueli; Christian Kames; Xu Li; Li Guo; Carlos Milovic; Jinsuh Kim; Hongjiang Wei; Kristian Bredies; Sagar Buch; Yihao Guo; Zhe Liu; Jakob Meineke; Alexander Rauscher; José P Marques; Berkin Bilgic
Journal:  Magn Reson Med       Date:  2017-07-31       Impact factor: 4.668

10.  MEDI+0: Morphology enabled dipole inversion with automatic uniform cerebrospinal fluid zero reference for quantitative susceptibility mapping.

Authors:  Zhe Liu; Pascal Spincemaille; Yihao Yao; Yan Zhang; Yi Wang
Journal:  Magn Reson Med       Date:  2017-10-11       Impact factor: 4.668

View more
  3 in total

1.  QQ-NET - using deep learning to solve quantitative susceptibility mapping and quantitative blood oxygen level dependent magnitude (QSM+qBOLD or QQ) based oxygen extraction fraction (OEF) mapping.

Authors:  Junghun Cho; Jinwei Zhang; Pascal Spincemaille; Hang Zhang; Simon Hubertus; Yan Wen; Ramin Jafari; Shun Zhang; Thanh D Nguyen; Alexey V Dimov; Ajay Gupta; Yi Wang
Journal:  Magn Reson Med       Date:  2021-10-31       Impact factor: 3.737

2.  Deep neural network for water/fat separation: Supervised training, unsupervised training, and no training.

Authors:  Ramin Jafari; Pascal Spincemaille; Jinwei Zhang; Thanh D Nguyen; Xianfu Luo; Junghun Cho; Daniel Margolis; Martin R Prince; Yi Wang
Journal:  Magn Reson Med       Date:  2020-10-26       Impact factor: 4.668

3.  A review and experimental evaluation of deep learning methods for MRI reconstruction.

Authors:  Arghya Pal; Yogesh Rathi
Journal:  J Mach Learn Biomed Imaging       Date:  2022-03-11
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.