Literature DB >> 31978386

The hidden world of membrane microproteins.

Catherine A Makarewich1.   

Abstract

Proteins are critical components of biological membranes and play key roles in many essential cellular processes. Membrane proteins are a structurally and functionally diverse family of proteins that have recently expanded to include a number of newly discovered tiny proteins called microproteins, or micropeptides. These microproteins are generated from small open reading frames, which produce protein products that are less than 100 amino acids in length. While not all microproteins are membrane proteins, this review will focus specifically on this subclass to highlight some of the important biological activities that have been ascribed to these molecules and to emphasize their promise as exciting new players in membrane biology.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Membrane protein; Micropeptide; Microprotein; sORF

Mesh:

Substances:

Year:  2020        PMID: 31978386      PMCID: PMC7050383          DOI: 10.1016/j.yexcr.2020.111853

Source DB:  PubMed          Journal:  Exp Cell Res        ISSN: 0014-4827            Impact factor:   3.905


  46 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  A micropeptide encoded by a putative long noncoding RNA regulates muscle performance.

Authors:  Douglas M Anderson; Kelly M Anderson; Chi-Lun Chang; Catherine A Makarewich; Benjamin R Nelson; John R McAnally; Prasad Kasaragod; John M Shelton; Jen Liou; Rhonda Bassel-Duby; Eric N Olson
Journal:  Cell       Date:  2015-01-29       Impact factor: 41.582

3.  lncRNA-Encoded Polypeptide SPAR(s) with mTORC1 to Regulate Skeletal Muscle Regeneration.

Authors:  Shahragim Tajbakhsh
Journal:  Cell Stem Cell       Date:  2017-04-06       Impact factor: 24.633

4.  The Translational Landscape of the Human Heart.

Authors:  Sebastiaan van Heesch; Franziska Witte; Valentin Schneider-Lunitz; Jana F Schulz; Eleonora Adami; Allison B Faber; Marieluise Kirchner; Henrike Maatz; Susanne Blachut; Clara-Louisa Sandmann; Masatoshi Kanda; Catherine L Worth; Sebastian Schafer; Lorenzo Calviello; Rhys Merriott; Giannino Patone; Oliver Hummel; Emanuel Wyler; Benedikt Obermayer; Michael B Mücke; Eric L Lindberg; Franziska Trnka; Sebastian Memczak; Marcel Schilling; Leanne E Felkin; Paul J R Barton; Nicholas M Quaife; Konstantinos Vanezis; Sebastian Diecke; Masaya Mukai; Nancy Mah; Su-Jun Oh; Andreas Kurtz; Christoph Schramm; Dorothee Schwinge; Marcial Sebode; Magdalena Harakalova; Folkert W Asselbergs; Aryan Vink; Roel A de Weger; Sivakumar Viswanathan; Anissa A Widjaja; Anna Gärtner-Rommel; Hendrik Milting; Cris Dos Remedios; Christoph Knosalla; Philipp Mertins; Markus Landthaler; Martin Vingron; Wolfgang A Linke; Jonathan G Seidman; Christine E Seidman; Nikolaus Rajewsky; Uwe Ohler; Stuart A Cook; Norbert Hubner
Journal:  Cell       Date:  2019-05-30       Impact factor: 41.582

5.  Identification of small ORFs in vertebrates using ribosome footprinting and evolutionary conservation.

Authors:  Ariel A Bazzini; Timothy G Johnstone; Romain Christiano; Sebastian D Mackowiak; Benedikt Obermayer; Elizabeth S Fleming; Charles E Vejnar; Miler T Lee; Nikolaus Rajewsky; Tobias C Walther; Antonio J Giraldez
Journal:  EMBO J       Date:  2014-04-04       Impact factor: 11.598

6.  Newly Discovered Micropeptide Regulators of SERCA Form Oligomers but Bind to the Pump as Monomers.

Authors:  Deo R Singh; Michael P Dalton; Ellen E Cho; Marsha P Pribadi; Taylor J Zak; Jaroslava Šeflová; Catherine A Makarewich; Eric N Olson; Seth L Robia
Journal:  J Mol Biol       Date:  2019-08-23       Impact factor: 5.469

7.  Hundreds of putatively functional small open reading frames in Drosophila.

Authors:  Emmanuel Ladoukakis; Vini Pereira; Emile G Magny; Adam Eyre-Walker; Juan Pablo Couso
Journal:  Genome Biol       Date:  2011-11-25       Impact factor: 13.583

8.  Ribosome profiling of mouse embryonic stem cells reveals the complexity and dynamics of mammalian proteomes.

Authors:  Nicholas T Ingolia; Liana F Lareau; Jonathan S Weissman
Journal:  Cell       Date:  2011-11-03       Impact factor: 41.582

9.  Extensive translation of small Open Reading Frames revealed by Poly-Ribo-Seq.

Authors:  Julie L Aspden; Ying Chen Eyre-Walker; Rose J Phillips; Unum Amin; Muhammad Ali S Mumtaz; Michele Brocard; Juan-Pablo Couso
Journal:  Elife       Date:  2014-08-21       Impact factor: 8.140

10.  Extensive identification and analysis of conserved small ORFs in animals.

Authors:  Sebastian D Mackowiak; Henrik Zauber; Chris Bielow; Denise Thiel; Kamila Kutz; Lorenzo Calviello; Guido Mastrobuoni; Nikolaus Rajewsky; Stefan Kempa; Matthias Selbach; Benedikt Obermayer
Journal:  Genome Biol       Date:  2015-09-14       Impact factor: 13.583

View more
  10 in total

1.  An Integrated Approach for Microprotein Identification and Sequence Analysis.

Authors:  Omar Brito-Estrada; Keira R Hassel; Catherine A Makarewich
Journal:  J Vis Exp       Date:  2022-07-12       Impact factor: 1.424

2.  Calcium cycling as a mediator of thermogenic metabolism in adipose tissue.

Authors:  Adrienne R Guarnieri; Tyler W Benson; Michael Tranter
Journal:  Mol Pharmacol       Date:  2022-05-03       Impact factor: 4.054

Review 3.  Nothing Regular about the Regulins: Distinct Functional Properties of SERCA Transmembrane Peptide Regulatory Subunits.

Authors:  Nishadh Rathod; Jessi J Bak; Joseph O Primeau; M'Lynn E Fisher; Lennane Michel Espinoza-Fonseca; Mary Joanne Lemieux; Howard S Young
Journal:  Int J Mol Sci       Date:  2021-08-18       Impact factor: 5.923

4.  A putative long noncoding RNA-encoded micropeptide maintains cellular homeostasis in pancreatic β cells.

Authors:  Mark Li; Fan Shao; Qingwen Qian; Wenjie Yu; Zeyuan Zhang; Biyi Chen; Dan Su; Yuwei Guo; An-Vi Phan; Long-Sheng Song; Samuel B Stephens; Julien Sebag; Yumi Imai; Ling Yang; Huojun Cao
Journal:  Mol Ther Nucleic Acids       Date:  2021-07-16       Impact factor: 10.183

5.  Interpretable Deep Learning Model Reveals Subsequences of Various Functions for Long Non-Coding RNA Identification.

Authors:  Rattaphon Lin; Duangdao Wichadakul
Journal:  Front Genet       Date:  2022-05-24       Impact factor: 4.772

6.  A kink in DWORF helical structure controls the activation of the sarcoplasmic reticulum Ca2+-ATPase.

Authors:  U Venkateswara Reddy; Daniel K Weber; Songlin Wang; Erik K Larsen; Tata Gopinath; Alfonso De Simone; Seth Robia; Gianluigi Veglia
Journal:  Structure       Date:  2021-12-06       Impact factor: 5.006

7.  Structural basis for sarcolipin's regulation of muscle thermogenesis by the sarcoplasmic reticulum Ca2+-ATPase.

Authors:  Songlin Wang; Tata Gopinath; Erik K Larsen; Daniel K Weber; Caitlin Walker; Venkateswara Reddy Uddigiri; Kaustubh R Mote; Sanjaya K Sahoo; Muthu Periasamy; Gianluigi Veglia
Journal:  Sci Adv       Date:  2021-11-26       Impact factor: 14.136

Review 8.  Short open reading frames (sORFs) and microproteins: an update on their identification and validation measures.

Authors:  Alyssa Zi-Xin Leong; Pey Yee Lee; M Aiman Mohtar; Saiful Effendi Syafruddin; Yuh-Fen Pung; Teck Yew Low
Journal:  J Biomed Sci       Date:  2022-03-17       Impact factor: 8.410

9.  Evolutionary Characterization of the Short Protein SPAAR.

Authors:  Jiwon Lee; Aaron Wacholder; Anne-Ruxandra Carvunis
Journal:  Genes (Basel)       Date:  2021-11-24       Impact factor: 4.096

10.  The cardiac-enriched microprotein mitolamban regulates mitochondrial respiratory complex assembly and function in mice.

Authors:  Catherine A Makarewich; Amir Z Munir; Svetlana Bezprozvannaya; Aaron M Gibson; Soo Young Kim; Misty S Martin-Sandoval; Thomas P Mathews; Luke I Szweda; Rhonda Bassel-Duby; Eric N Olson
Journal:  Proc Natl Acad Sci U S A       Date:  2022-02-08       Impact factor: 12.779

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.