Literature DB >> 31977200

Active Analyte Import Improves the Dynamic Range and Sensitivity of a Vitamin B12 Biosensor.

Monica P McNerney1, Fernanda Piorino1, Cirstyn L Michel1, Mark P Styczynski1.   

Abstract

Cell-free systems provide a versatile platform for the development of low-cost, easy-to-use sensors for diverse analytes. However, sensor affinity dictates response sensitivity, and improving binding affinity can be challenging. Here, we describe efforts to address this problem while developing a biosensor for vitamin B12, a critical micronutrient. We first use a B12-responsive transcription factor to enable B12-dependent output in a cell-free reaction, but the resulting sensor responds to B12 far above clinically relevant concentrations. Surprisingly, when expressed in cells, the same sensor mediates a much more sensitive response to B12. The sensitivity difference is partly due to regulated import that accumulates cytoplasmic B12. Overexpression of importers further improves sensitivity, demonstrating an inherent advantage of whole-cell sensors. The resulting cells can respond to B12 in serum, can be lyophilized, and are functional in a minimal-equipment environment, showing the potential utility of whole-cell sensors as sensitive, field-deployable diagnostics.

Entities:  

Keywords:  cell-free sensors; circuit tuning; diagnostics; whole-cell sensors

Mesh:

Substances:

Year:  2020        PMID: 31977200      PMCID: PMC7186122          DOI: 10.1021/acssynbio.9b00429

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  39 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

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Journal:  Biochim Biophys Acta       Date:  2008-02-11

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Authors:  Michael C Jewett; James R Swartz
Journal:  Biotechnol Bioeng       Date:  2004-04-05       Impact factor: 4.530

5.  Energy-coupled transport across the outer membrane of Escherichia coli: ExbB binds ExbD and TonB in vitro, and leucine 132 in the periplasmic region and aspartate 25 in the transmembrane region are important for ExbD activity.

Authors:  V Braun; S Gaisser; C Herrmann; K Kampfenkel; H Killmann; I Traub
Journal:  J Bacteriol       Date:  1996-05       Impact factor: 3.490

6.  Point-of-Use Detection of Environmental Fluoride via a Cell-Free Riboswitch-Based Biosensor.

Authors:  Walter Thavarajah; Adam D Silverman; Matthew S Verosloff; Nancy Kelley-Loughnane; Michael C Jewett; Julius B Lucks
Journal:  ACS Synth Biol       Date:  2019-12-20       Impact factor: 5.110

7.  Paper-based synthetic gene networks.

Authors:  Keith Pardee; Alexander A Green; Tom Ferrante; D Ewen Cameron; Ajay DaleyKeyser; Peng Yin; James J Collins
Journal:  Cell       Date:  2014-10-23       Impact factor: 41.582

8.  Development of a Pigment-Based Whole-Cell Zinc Biosensor for Human Serum.

Authors:  Daniel M Watstein; Mark P Styczynski
Journal:  ACS Synth Biol       Date:  2017-12-22       Impact factor: 5.110

Review 9.  Ethanolamine Utilization in Bacteria.

Authors:  Karan Gautam Kaval; Danielle A Garsin
Journal:  MBio       Date:  2018-02-20       Impact factor: 7.867

10.  Dynamic and tunable metabolite control for robust minimal-equipment assessment of serum zinc.

Authors:  Monica P McNerney; Cirstyn L Michel; Krishi Kishore; Janet Standeven; Mark P Styczynski
Journal:  Nat Commun       Date:  2019-12-04       Impact factor: 14.919

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  4 in total

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Authors:  Harini Sridharan; Fernanda Piorino; Mark P Styczynski
Journal:  Curr Opin Biotechnol       Date:  2022-03-02       Impact factor: 10.279

2.  Translational Detection of Indole by Complementary Cell-free Protein Synthesis Assay.

Authors:  You Jin Lee; Soojin Lee; Dong-Myung Kim
Journal:  Front Bioeng Biotechnol       Date:  2022-05-13

3.  Cell-free biosensors for rapid detection of water contaminants.

Authors:  Jaeyoung K Jung; Khalid K Alam; Matthew S Verosloff; Daiana A Capdevila; Morgane Desmau; Phillip R Clauer; Jeong Wook Lee; Peter Q Nguyen; Pablo A Pastén; Sandrine J Matiasek; Jean-François Gaillard; David P Giedroc; James J Collins; Julius B Lucks
Journal:  Nat Biotechnol       Date:  2020-07-06       Impact factor: 54.908

Review 4.  Theranostic cells: emerging clinical applications of synthetic biology.

Authors:  Monica P McNerney; Kailyn E Doiron; Tai L Ng; Timothy Z Chang; Pamela A Silver
Journal:  Nat Rev Genet       Date:  2021-07-07       Impact factor: 53.242

  4 in total

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