Velmurugan Janaki Devi1, Raman Lakshmisundaram2, Jamuna R Subramaniam1. 1. Center for Preclinical and Translational Medicine Research. 2. Sophisticated Instrument Facility, Central Research Facility, Sri Ramachandra Institute of Higher Education and Research (Deemed University), Porur, Chennai 600 116, India.
Abstract
BACKGROUND: Identification of novel drugs by bio-prospecting natural products like various parts of the plants, or other extracts and drug discovery requires differential fractionation with various organic solvents followed by their concentration through evaporation under nitrogen gas, which is a standard practice. PURPOSE: Determination of contribution of vehicle control of organic solvents (chloroform, ethanol, ethyl acetate and n-hexane) processed in the similar manner in the modulation of acetylcholine(ACh) neurotransmission in Caenorhabditis elegans, Aldicarb induced paralysis assay. METHODS: The organic solvents concentrated as described in background was used to identify their contribution in ACh modulation through ACh esterase inhibitor, Aldicarb, treatment of C. elegans, which leads to time dependent paralysis of the worms. RESULTS: The vehicle, organic solvents, control itself bestows modulation of acetylcholine release as Aldicarb resistance in C. elegans. CONCLUSION: Given the exorbitant cost and time taken for drug discovery, identification of efficacy of bioactive molecules fractionated through organic solvents and concentrated under nitrogen gas should have appropriate vehicle control as described above to avoid the rate of false positives. This is universally applicable whether the drug is chemically synthesized or purified from natural products.
BACKGROUND: Identification of novel drugs by bio-prospecting natural products like various parts of the plants, or other extracts and drug discovery requires differential fractionation with various organic solvents followed by their concentration through evaporation under nitrogen gas, which is a standard practice. PURPOSE: Determination of contribution of vehicle control of organic solvents (chloroform, ethanol, ethyl acetate and n-hexane) processed in the similar manner in the modulation of acetylcholine(ACh) neurotransmission in Caenorhabditis elegans, Aldicarb induced paralysis assay. METHODS: The organic solvents concentrated as described in background was used to identify their contribution in ACh modulation through ACh esterase inhibitor, Aldicarb, treatment of C. elegans, which leads to time dependent paralysis of the worms. RESULTS: The vehicle, organic solvents, control itself bestows modulation of acetylcholine release as Aldicarb resistance in C. elegans. CONCLUSION: Given the exorbitant cost and time taken for drug discovery, identification of efficacy of bioactive molecules fractionated through organic solvents and concentrated under nitrogen gas should have appropriate vehicle control as described above to avoid the rate of false positives. This is universally applicable whether the drug is chemically synthesized or purified from natural products.
Bioprospecting of natural products, identification of single bioactive molecules from
the natural products is a very expensive, time consuming, but one of the most
successful model of drug discovery for various diseases as seen in the discovery of
anticancer drugs Taxol and Camptothecin from their respective tree barks [1]. Caenorhabditis elegans is
an excellent model for preclinical drug discovery [2]. C. elegans has been used for identification of
various drugs [2] and antimicrobials from
Actinomycytes [3].C. elegans has significantly contributed to the understanding of
synaptic structure and function. The historical chemical (Ethyl methyl
sulfonate-EMS) genetic mutagenesis by the founding father of the C.
elegans system, Sydney Brenner [4], followed by screening for the simple, elegant, un-co-ordinated
(unc) movement phenotype to identify the specific genes that
play a role in neurotransmission, has unravelled the mechanism of neurotransmission
and its components. Further, aldicarb sensitive/resistant mutants have shed light on
acetylcholine neurotransmission and decipher the synaptic structure and function at
the neuromuscular junction (acetylcholine is the major neurotransmitter system for
movement in C. elegans) [5]. This has led to the deciphering of the same in the higher organisms
including humans.C. elegans is a very good model for preclinical drug discovery,
especially neurodegenerative diseases like Alzheimer disease [6-7] for which the current
treatment is inhibition of the excitatory neurotransmitter, acetylcholine, degrading
enzyme, acetylcholine esterase. One of the very simple, yet powerful assay for
identification of acetylcholine release modulation at the neuromuscular junction of
C. elegans is the utilization of acetylcholine esterase (AChE)
inhibitor, aldicarb [5,8,7]. Because of the AChE
inhibition, acetylcholine accumulates at the neuromuscular junction (NMJ) leading to
continuous activation of the ionotropic ACh receptors in the muscle leading to
paralysis. This acute Aldicarb induced paralysis (AIP) follows a time course up to
120 minutes. The compound treatment or gene mutants which accelerates AIP are
stimulating and increasing ACh release (aldicarb hypersensitive- alh),
while the ones which slows down AIP is modulating/reducing ACh release (aldicarb
resistance- alr).During, any bio-prospecting or drug discovery process the extracts/compounds are
differentially fractionated with organic solvents, ethanol, n-hexane, chloroform and
ethyl acetate for enrichment and to obtain pure bioactive molecule eventually,
followed by concentration through evaporation of organic solvents under Nitrogen
gas. During this process, only the almost dry compound(s) will be present. For
example, the antimalarial drug, artemisinin, is purified using ethanol and/or
n-hexane [9]. Similarly, forskolin, the cAMP
activating compound extraction from the roots of Coleus forskohlii
involves organic solvent extraction [10]. The
Anticancer drug, taxol yield could be increased with organic solvents, like
dibutylphthalate extraction [11]. All these
emphasize the importance of organic solvent extraction to obtain drugs. While these
are for increasing the yield of the established drugs, bioprospecting for new drug
discovery is completely different. Bioassay is the only predictor of the active
molecule.Here, we address the significant (false) positive contribution of the organic
solvents utilized for extraction and concentration of various compounds in the
aldicarb assays of the C. elegans system as a proof of concept so
that caution could be exercised given the enormous cost and the time taken for drug
discovery.
Methods
Wild type N2 worms, Aldicarb (Sigma Aldrich), Chloroform, n-hexane and ethyl acetate
are from Merck (analytical grade- EMPLURA). Ethanol (99.9% pure) is from Changshu
Hongsheng Fine Chemicals,China.
Solvent
4 ml of each solvent (Ethyl acetate, hexane, Chloroform and ethanol) was
evaporated under Nitrogen gas in glass tubes in BiotageTurboVap –LV-
Concentrator, and the dried remnants was dissolved in 700ul of 85% aqueous
ethanol. 40 ul of this was mixed with 160ul of M9 buffer and spread on the OP50
lawn containing NGM plates (35 mm) dried for 30 minutes and used.
Solvent treatment
Synchronous population of wildtype N2 worms grown by standard conditions
(Brenner, 1974) at 20oC, obtained through timed egg laying, were
exposed to these solvents concentrated and reconstituted in 85% ethanol,
starting from embryo stage and the aldicarb assay was carried out on day 3
counting L4 as day0.
Aldicarb assay
Half an hour before use 1mM aldicarb (Sigma Aldrich) in 70% ethanol was spread on
fresh nematode growth medium (NGM) plates containing OP50 lawn with and without
the solvent (Saharia et al., 2012). Around 30–50, 3 day old
worms, counting L4 stage as Day 0, were transferred to these plates and
paralysis was followed at 0, 1hr , 2hr and 3hr time points. The assay was
repeated three times. Cumulative percentage paralyzed worms (N = 130) at 2 hrs
was compared between control and various treatments. By 3 hrs all the worms got
paralyzed in control and organic solvents. Statistical analysis was carried out
using SigmaPlot 10.
Results
As organic solvents are widely used during the bioprospecting of natural products for
novel drug discovery, it becomes imperative to exercise extreme caution due to the
long duration in years (more than a decade) and exhorbitant cost. In one such
scenario, to our surprise, we find that the organic solvents that are used for
differential fractionation for enrichment of bioactive molecules followed by
evaporation under the inert nitrogen gas, per se, after evaporation in the same
manner and the dried remnants dissolved in 85% ethanol, generally used vehicle
control could bring about significant changes in the aldicarb sensitivity profile in
C. elegans.When treated from embryo stage onwards, ethyl acetate, chloroform, ethanol and
n-hexane induced Aldicarb resistance, alr , the worms are not motile
(moving from one point to other), but wriggle their body (Fig. 1), instead of complete paralysis even after 2hrs of
aldicarb treatment. While only the control showed ~30% paralysis after 1 h, all the
worms got paralyzed both in control and organic solvents by 3hrs in the presence of
aldicarb. In addition, the Aldicarb resistance (Fig. 2) brought about in the organic solvents was statistically
significant.
Fig. 1:
Differential Aldicarb resistance upon organic solvent treatment
Fig. 2.
Organic solvents induced Aldicarb resistance
Differential Aldicarb resistance upon organic solvent treatmentOrganic solvents induced Aldicarb resistanceControl – M9 buffer; Chloroform, ethyl acetate, n-hexane and ethanol are the
respective solvent treated worms as they appear when placed in Aldicarb. Thin arrows
in control indicate the paralysed worms while partially paralysed (which could
wriggle and drag, but cannot move fast from one place to another) are indicated by
thick arrows at 2hrs of aldicarb treatment.The Y –axis is Percentage of worms paralyzed at 2hrs. C- Control (M9 buffer); E-
Ethanol; EA- Ethyl acetate; Hex- n-hexane; Ch- Chloroform; The total number of worms
for each treatment is 130.
Discussion
Organic solvent extraction is one of the time tested method of obtaining bioactive
molecules from crude phyto-compounds, other natural products and chemically
synthesized entities. Some of the plant derived drugs like Taxol and artemisinin
yield could be significantly enhanced through extraction with n-hexane [9] and dibutylphthalate [10], respectively. Further, organic solvents are widely used in
the recovery and biotransformation of antibiotics like erythromycin [12].Differential fractionation with organic solvents like n-hexane, ethanol, chloroform
and ethyl acetate is very common in medicinal chemistry, bioprospecting for active
biomolecules in the mega cocktail of natural products (Fain et al.,
2017). The false positive effects of processed organic solvents which acts as
vehicle control in the aldicarb assays (Fig.
1 and Fig. 2) of
C.elegans (Saharia et al., 2012) is implicating the necessity
for extreme caution in all drug screening bioassays, given the enormous cost and the
time frame of more than a decade and a half for drug discovery.Further, deciphering the mechanism of such vehicle induced aldicarb resistance,
especially, wriggling in the same place and not rigid paralysis could provide
fundamental insights into neurotransmission, especially of acetylcholine.
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