Literature DB >> 31974573

Measuring mRNA translation in neuronal processes and somata by tRNA-FRET.

Bella Koltun1, Sivan Ironi1, Noga Gershoni-Emek1, Iliana Barrera1, Mohammad Hleihil1, Siddharth Nanguneri2, Ranjan Sasmal3, Sarit S Agasti3, Deepak Nair2, Kobi Rosenblum1,4.   

Abstract

In neurons, the specific spatial and temporal localization of protein synthesis is of great importance for function and survival. Here, we visualized tRNA and protein synthesis events in fixed and live mouse primary cortical culture using fluorescently-labeled tRNAs. We were able to characterize the distribution and transport of tRNAs in different neuronal sub-compartments and to study their association with the ribosome. We found that tRNA mobility in neural processes is lower than in somata and corresponds to patterns of slow transport mechanisms, and that larger tRNA puncta co-localize with translational machinery components and are likely the functional fraction. Furthermore, chemical induction of long-term potentiation (LTP) in culture revealed up-regulation of mRNA translation with a similar effect in dendrites and somata, which appeared to be GluR-dependent 6 h post-activation. Importantly, measurement of protein synthesis in neurons with high resolutions offers new insights into neuronal function in health and disease states.
© The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research.

Entities:  

Year:  2020        PMID: 31974573      PMCID: PMC7102941          DOI: 10.1093/nar/gkaa042

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  114 in total

1.  Selective identification of newly synthesized proteins in mammalian cells using bioorthogonal noncanonical amino acid tagging (BONCAT).

Authors:  Daniela C Dieterich; A James Link; Johannes Graumann; David A Tirrell; Erin M Schuman
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-12       Impact factor: 11.205

Review 2.  Mechanisms of trafficking in axons and dendrites: implications for development and neurodegeneration.

Authors:  M P Sheetz; K K Pfister; J C Bulinski; C W Cotman
Journal:  Prog Neurobiol       Date:  1998-08       Impact factor: 11.685

Review 3.  mRNA transport & local translation in neurons.

Authors:  Caspar Glock; Maximilian Heumüller; Erin M Schuman
Journal:  Curr Opin Neurobiol       Date:  2017-06-17       Impact factor: 6.627

4.  Diversity of human tRNA genes from the 1000-genomes project.

Authors:  Marc Parisien; Xiaoyun Wang; Tao Pan
Journal:  RNA Biol       Date:  2013-12-09       Impact factor: 4.652

Review 5.  The neuronal activity-driven transcriptome.

Authors:  Eva Benito; Angel Barco
Journal:  Mol Neurobiol       Date:  2014-06-17       Impact factor: 5.590

Review 6.  Intracellular transport in neurons.

Authors:  B Grafstein; D S Forman
Journal:  Physiol Rev       Date:  1980-10       Impact factor: 37.312

Review 7.  Translation matters: protein synthesis defects in inherited disease.

Authors:  Gert C Scheper; Marjo S van der Knaap; Christopher G Proud
Journal:  Nat Rev Genet       Date:  2007-07-31       Impact factor: 53.242

8.  Asymmetrical beta-actin mRNA translation in growth cones mediates attractive turning to netrin-1.

Authors:  Kin-Mei Leung; Francisca P G van Horck; Andrew C Lin; Rachel Allison; Nancy Standart; Christine E Holt
Journal:  Nat Neurosci       Date:  2006-09-17       Impact factor: 24.884

Review 9.  Modifications and functional genomics of human transfer RNA.

Authors:  Tao Pan
Journal:  Cell Res       Date:  2018-02-20       Impact factor: 25.617

10.  ThunderSTORM: a comprehensive ImageJ plug-in for PALM and STORM data analysis and super-resolution imaging.

Authors:  Martin Ovesný; Pavel Křížek; Josef Borkovec; Zdeněk Svindrych; Guy M Hagen
Journal:  Bioinformatics       Date:  2014-04-25       Impact factor: 6.937

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  5 in total

Review 1.  Selective motor activation in organelle transport along axons.

Authors:  Sydney E Cason; Erika L F Holzbaur
Journal:  Nat Rev Mol Cell Biol       Date:  2022-05-30       Impact factor: 113.915

Review 2.  A Ribosomal Perspective on Neuronal Local Protein Synthesis.

Authors:  Sudhriti Ghosh Dastidar; Deepak Nair
Journal:  Front Mol Neurosci       Date:  2022-02-23       Impact factor: 5.639

3.  Systematic Analysis of tRNA-Derived Small RNAs Reveals the Effects of Xuefu-Zhuyu Decoction on the Hippocampi of Rats after Traumatic Brain Injury.

Authors:  Feng Dai; Tao Tang; Ruohuang Lu; Pengfei Li; Dandan Feng; Mingrui Hu; Yang Wang; Pingping Gan
Journal:  Evid Based Complement Alternat Med       Date:  2022-09-17       Impact factor: 2.650

Review 4.  Homeostatic Roles of the Proteostasis Network in Dendrites.

Authors:  Erin N Lottes; Daniel N Cox
Journal:  Front Cell Neurosci       Date:  2020-08-14       Impact factor: 5.505

Review 5.  mRNA Trafficking in the Nervous System: A Key Mechanism of the Involvement of Activity-Regulated Cytoskeleton-Associated Protein (Arc) in Synaptic Plasticity.

Authors:  Michal Fila; Laura Diaz; Joanna Szczepanska; Elzbieta Pawlowska; Janusz Blasiak
Journal:  Neural Plast       Date:  2021-09-23       Impact factor: 3.599

  5 in total

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