Literature DB >> 31973692

Transcriptome profiling of laser-captured germ cells and functional characterization of zbtb40 during 17alpha-methyltestosterone-induced spermatogenesis in orange-spotted grouper (Epinephelus coioides).

Xi Wu1, Yang Yang1, Chaoyue Zhong1, Yin Guo1, Shuisheng Li2, Haoran Lin1, Xiaochun Liu3,4.   

Abstract

BACKGROUND: Spermatogenesis is an intricate process regulated by a finely organized network. The orange-spotted grouper (Epinephelus coioides) is a protogynous hermaphroditic fish, but the regulatory mechanism of its spermatogenesis is not well-understood. In the present study, transcriptome sequencing of the male germ cells isolated from orange-spotted grouper was performed to explore the molecular mechanism underlying spermatogenesis.
RESULTS: In this study, the orange-spotted grouper was induced to change sex from female to male by 17alpha-methyltestosterone (MT) implantation. During the spermatogenesis, male germ cells (spermatogonia, spermatocytes, spermatids, and spermatozoa) were isolated by laser capture microdissection. Transcriptomic analysis for the isolated cells was performed. A total of 244,984,338 clean reads were generated from four cDNA libraries. Real-time PCR results of 13 genes related to sex differentiation and hormone metabolism indicated that transcriptome data are reliable. RNA-seq data showed that the female-related genes and genes involved in hormone metabolism were highly expressed in spermatogonia and spermatozoa, suggesting that these genes participate in the spermatogenesis. Interestingly, the expression of zbtb family genes showed significantly changes in the RNA-seq data, and their expression patterns were further examined during spermatogenesis. The analysis of cellular localization of Eczbtb40 and the co-localization of Eczbtb40 and Eccyp17a1 in different gonadal stages suggested that Eczbtb40 might interact with Eccyp17a1 during spermatogenesis.
CONCLUSIONS: Our study, for the first time, investigated the transcriptome of the male germ cells from orange-spotted grouper, and identified functional genes, GO terms, and KEGG pathways involved in spermatogenesis. Furthermore, Eczbtb40 was first characterized and its role during spermatogenesis was predicted. These data will contribute to future studies on the molecular mechanism of spermatogenesis in teleosts.

Entities:  

Keywords:  Laser capture microdissection; Spermatogenesis; Transcriptome; zbtb40

Year:  2020        PMID: 31973692     DOI: 10.1186/s12864-020-6477-4

Source DB:  PubMed          Journal:  BMC Genomics        ISSN: 1471-2164            Impact factor:   3.969


  4 in total

1.  Integration of ATAC-seq and RNA-seq Unravels Chromatin Accessibility during Sex Reversal in Orange-Spotted Grouper (Epinephelus coioides).

Authors:  Xi Wu; Yang Yang; Chaoyue Zhong; Yin Guo; Tengyu Wei; Shuisheng Li; Haoran Lin; Xiaochun Liu
Journal:  Int J Mol Sci       Date:  2020-04-17       Impact factor: 5.923

2.  Single-Cell Atlas of Adult Testis in Protogynous Hermaphroditic Orange-Spotted Grouper, Epinephelus coioides.

Authors:  Xi Wu; Yang Yang; Chaoyue Zhong; Tong Wang; Yanhong Deng; Hengjin Huang; Haoran Lin; Zining Meng; Xiaochun Liu
Journal:  Int J Mol Sci       Date:  2021-11-22       Impact factor: 5.923

3.  Screening and Validation of p38 MAPK Involved in Ovarian Development of Brachymystax lenok.

Authors:  Tianqing Huang; Wei Gu; Enhui Liu; Lanlan Zhang; Fulin Dong; Xianchen He; Wenlong Jiao; Chunyu Li; Bingqian Wang; Gefeng Xu
Journal:  Front Vet Sci       Date:  2022-02-16

4.  Pou5f1 and Nanog Are Reliable Germ Cell-Specific Genes in Gonad of a Protogynous Hermaphroditic Fish, Orange-Spotted Grouper (Epinephelus coioides).

Authors:  Chaoyue Zhong; Meifeng Liu; Yuhao Tao; Xi Wu; Yang Yang; Tong Wang; Zining Meng; Hongyan Xu; Xiaochun Liu
Journal:  Genes (Basel)       Date:  2021-12-29       Impact factor: 4.096

  4 in total

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