Expression of miR-34a and Ki67 in nasopharyngeal carcinoma and the relationship with clinicopathological features and prognosis.

Expression levels of miR-34a and Ki67 in nasopharyngeal carcinoma (NPC) and the relationship with clinicopathological features and prognosis were studied. A prospective study was performed on 56 cases of NPC tissues and 56 cases of adjacent tissues collected in Xiangyang No. 1 People's Hospital. The expression levels of miR-34a, Ki67 in NPC and adjacent tissues were detected by RT-qPCR. The association among the expression levels of miR-34a and Ki67, the clinicopathological features and prognosis of patients was analyzed. The relative expression levels of miR-34a in 56 cases of NPC were lower than those of the adjacent tissues. The expression of miR-34a in NPC was significantly associated with bone metastasis and TNM staging (P<0.001). The relative expression of Ki67 in 56 cases of NPC was higher than that of the adjacent tissues. The expression of Ki67 in NPC was significantly associated with lymphatic metastasis and TNM staging (P<0.001). The 5-year survival of patients with low expression of miR-34a was significantly lower than that of patients with high expression, and the survival of patients with high expression of Ki67 was significantly lower than that of patients with low expression. According to Pearson's correlation analysis, Ki67 expression was negatively correlated with miR-34a expression in NPC tissues. In conclusion, the expression of Ki67 in NPC was upregulated, while the expression of miR-34a in NPC was downregulated. miR-34a expression in NPC was significantly associated with bone metastasis and TNM staging, and Ki67 expression in NPC was significantly associated with lymphatic metastasis and TNM staging. In addition, there was a negative correlation between miR-34a and Ki67 expression levels, and the two can be used as predictors of NPC-associated mortality. The expression levels of miR-34a and Ki67, as well as TNM staging were associated with the prognosis of NPC patients. Copyright: © Wei et al.

Introduction

Nasopharyngeal carcinoma (NPC) is a head and neck cancer with low survival rate and a fairly high incidence in its endemic region (1). The reported incidence of NPC in China is relatively higher than that in other parts of the world, with an incidence of 3.26/100,000. The incidence of NPC in males is 4.51/100,000, which is 2.32 times higher than that in females, and the mortality rate in China is 1.77/100,000 (2,3). The incidence of NPC in China is also regional; the incidence of NPC in the southern region is as high as 50/100,000 (4). At present, the main treatment for NPC is radiotherapy, chemotherapy, and their combination. However, the survival rate after treatment tends to decrease with the development of the disease. The 10-year overall survival rates for stages I, II, III and IV are 100, 87.1, 75.5 and 55.6%, respectively (5,6). The main causes of poor prognosis in NPC patients are local treatment failure and distant metastasis (7). Therefore, finding prognostic factors for NPC is more conducive compared to timely optimal treatment in improving the disease outcome.

MicroRNA, a small single stranded RNA molecule, has been widely studied. Some microRNAs have been found to be related to the development and disease in the process of life (8). The effect of microRNAs on NPC has also been studied. Cheng et al (9) have shown that the low expression of miR-122 can inhibit the proliferation of NPC cells and promote their apoptosis. Chen et al (10) have shown that miR-203a-3p inhibits the growth and metastasis of NPC tumors. In recent years, studies on miR-34a have been reported and have shown that miR-34a can inhibit the proliferation and metastasis of oral squamous carcinoma cells (11). However, whether miR-34a expression is also associated with NPC has not been clarified yet.

Ki67 is a marker used to evaluate cell proliferation and is highly expressed in malignant cells. However, Ki67 is often undetectable in normal cells. Therefore, it is often used to predict the progression of cancer (12). It has been reported that Ki67 can be used as an independent prognostic indicator of NPC, and its increase is associated with poor prognosis (13). However, there are few studies on the relationship between the clinicopathological features of NPC and Ki67.

In the present study, we investigated the expression levels of miR-34a and Ki67 in NPC, and explored their relationship with clinicopathological features and prognosis, to provide a reference for clinical use.

Patients and methods

Clinical data of patients

A prospective study was performed on cancer tissues of 56 NPC patients who underwent needle biopsy from March 2011 to December 2013 in Xiangyang No. 1 People's Hospital (Xiangyang, China). These tissues were selected as the study group, while the adjacent tissues (~2 cm away from the lesion) comprised the control group. There were 41 males and 15 females with an average age of 52.44±13.75 years. The clinical staging criteria were based on the NPC Diagnostic Criteria (14), as set out by the Cancer Staging Guide of the American Joint Committee on Cancer in 2010. The study was approved by the Medical Ethics Committee of Xiangyang No. 1 People's Hospital (no. JS2011HHHC012) and all the patients were informed and signed an informed consent form.

Inclusion and exclusion criteria

Inclusion criteria: Patients diagnosed with NPC by imaging and pathology; patients that hadn't undergone radiotherapy and chemotherapy before the needle biopsy; patients without distant metastasis; patients with complete clinical data; patients that could be followed up by telephone. Exclusion criteria: Patients with other otorhinolaryngological diseases; patients with other malignant tumors; patients with severe cardio-cerebrovascular disease; patients with severe inflammation; pregnant or lactating women.

Main instruments and reagents

PCR instrument (ABI 7500; Applied Biosystems; Thermo Fisher Scientific, Inc.), Ultraviolet spectrophotometer (6135000041; Eppendorf, Inc.), total RNA extraction EasyPure miRNA kit (ER601-01; Beijing Transgen Biotech Co., Ltd.), reverse transcription and PCR kit TransScript miRNA First-Strand cDNA Synthesis SuperMix (AT351-01; Beijing Transgen Biotech Co., Ltd.). TransStart® Tip Green qPCR SuperMix (+Dye II) (AQ142-21; Beijing Transgen Biotech Co., Ltd.). All primers were designed and synthesized by Shanghai Shenggong Biological Co., Ltd. (Table I).

Table I.

Primer sequences.

Genes	Upstream primers	Downstream primers
miR-34a	5′-CTAGCTAGCTTGCTGTCCGCTTGATACTGG-3′	5′-GGAAGATCTCCCCGATCTGGTCACCGA-3′
Ki67	5′-AAACCCCACCAAGTAAAACA-3′	5′-CCAAGGCAAGCTCAGGAC-3′
GAPDH	5′-AAAGAAGCTCAACTACATGG-3′	5′-TGCAAAGAATGCGTCCCAGAG-3′
U6	5′-CTCGCTTCGGCAGCACA-3′	5′-AACGCTTCACGAATTTGCGT-3′

RT-qPCR detection method

Tissue (3 mm) stored at −80°C was ground in liquid nitrogen. Total RNA from tissue suspension was extracted in strict accordance with the manufacturer's instructions of total RNA extraction kit. The purity and concentration of RNA were detected using ultraviolet spectrophotometer and agarose gel electrophoresis. Total RNA was then reversely transcribed using the TransScript® miRNA RT Enzyme Mix and 2X TS miRNA Reaction Mix (AT351-01; Beijing Transgen Biotech Co., Ltd.). After shaking, total RNA was insulated at 30°C for 5 min and then incubated at 42°C for 50 min in strict accordance with the manufacturer's instructions. Next, PCR amplification was carried out in a 20-µl reaction volume containing 1 µl of cDNA, 0.4 µl of each upstream and downstream primers, 10 µl of 2X TransStart® Tip Green qPCR SuperMix and 0.4 µl of Passive Reference Dye (50X), to a final volume made up by ddH2O. PCR conditions were as follows: Pre-denaturation at 94°C for 30 sec, denaturation at 94°C for 5 sec, and annealing and extension at 60°C for 30 sec, for a total of 40 cycles. Each sample was tested in 3 repeat wells, and the experiment was carried out 3 times. U6 and GAPDH were used as internal reference for miR-34a and Ki67, respectively, and the 2−∆∆Cq method (15) was used to analyze the data.

Follow up

Fifty-six patients were followed up by telephone and visit. Follow-up was conducted every 3 months for 1–2 years after operation, and then at each 6 months for 2–5 years after operation. The follow-up period was 5 years and the deadline was December 2018. All patients were followed up, with an average time of 51 months. The overall survival time was from the first day of the operation to the last follow-up or death.

Outcome measures

The expression levels of miR-34a and Ki67 in the study and the control group were compared, and the 5-year survival of the patients was recorded. At 5 years, the patients were divided into two groups: The survival group and the deceased group. Multivariate COX regression was used to analyze the relevant factors and Pearson's correlation analysis was used to analyze the correlation between miR-34a and Ki67 in NPC tissues.

The optimal cut-off values of miR-34a- and Ki67-associated mortality in NPC were analyzed by receiver operating characteristic (ROC) curves. The best cut-off values of miR-34a and Ki67 were divided into high- and low-expression groups to observe the 5-year mortality and to draw Kaplan-Meier survival curves.

Statistical analysis

SPSS 20.0 medical statistical analysis software (IBM Corp.) was used for the statistical analysis of the collected data, and GraphPad Prism 7 (GraphPad Software, Inc.) for plotting the figures. Enumeration data were expressed as rate (%) and tested by Chi-square test. Measurement data were expressed as the mean ± standard deviation (means ± SD). All measurement data followed a normal distribution. Independent samples t-test was used for their comparison between two groups. The 5-year survival was analyzed by Kaplan-Meier survival analysis. The ability of miR-34a and Ki67 to diagnose NPC-associated mortality was analyzed by log-rank test and was evaluated by ROC curves analysis. Multiple factor Cox regression test was used for multivariate analysis of survival. Pearson's correlation analysis was used for analyzing the correlation between miR-34a and Ki67 expression in NPC tissues. P<0.05 was considered to indicate a statistically significant difference.

Results

Expression of miR-34a and Ki67 in the study and control groups

By comparing the expression levels of miR-34a and Ki67 between the two groups, it was found that the relative expression of miR-34a in the study group was significantly lower than that in the control group, and there was a significant difference between the two groups (P<0.05). The relative expression of Ki67 in the study group was significantly higher than that in the control group (P<0.05) (Table II).

Table II.

Expression levels of miR-34a and Ki67 in the study and control groups.

Index	Study group (n=56)	Control group (n=56)	t value	P-value
miR-34a	4.285±0.208	5.147±0.257	19.510	<0.001
Ki67	8.673±0.435	6.947±0.237	26.073	<0.001

Association of miR-34a, Ki67 and clinicopathological features in patients with NPC

By analyzing the expression levels of miR-34a and Ki67, it was found that the expression of miR-34a was significantly associated with bone metastasis and TNM staging (P<0.05). The expression of Ki67 in NPC was significantly associated with lymphatic metastasis and TNM staging (P<0.05) (Table III).

Table III.

Association of miR-34a and Ki67 with the clinicopathological features in patients with NPC.

Clinicopathological features	n	miR-34a (n=56)	t value	P-value	Ki67 (n=56)	t value	P-value
Age (years)			0.302	0.764		0.196	0.846
<50	27	4.804±0.212			8.037±0.368
≥50	29	4.787±0.209			8.018±0.359
Sex			0.462	0.646		0.662	0.511
Male	41	4.675±0.221			7.856±0.372
Female	15	4.706±0.226			7.784±0.326
Smoking history			1.627	0.110		0.063	0.950
Yes	25	4.497±0.217			8.022±0.418
No	31	4.616±0.224			8.015±0.415
Differentiation			0.898	0.373		0.171	0.866
Undifferentiated	14	4.772±0.236			7.982±0.387
Low and moderately differentiated	42	4.844±0.267			8.003±0.403
Bone metastasis			9.020	<0.001		0.069	0.945
Yes	19	4.334±0.202			8.029±0.417
No	37	4.947±0.258			8.021±0.408
Lymphatic metastasis			0.708	0.482		8.951	<0.001
Yes	18	4.578±0.225			7.847±0.384
No	38	4.624±0.228			6.984±0.313
Local invasion of tumor			0.725	0.472		0.926	0.359
Yes	24	4.734±0.243			7.815±0.357
No	32	4.782±0.247			7.729±0.334
TNM staging			10.110	<0.001		20.535	<0.001
Stage I–II	33	4.884±0.236			6.324±0.305
Stage III–IV	23	4.263±0.211			8.293±0.413

NPC, nasopharyngeal carcinoma.

Diagnostic value of miR-34a and Ki67 in NPC-associated mortality

Patients were divided into survival group and deceased group according to their survival. ROC curves were drawn for the expression levels of miR-34a and Ki67 in both groups to analyze the diagnostic value of the two indexes in NPC. The area under curve (AUC) for miR-34a was 0.785, the 95% CI was 0.649–0.922, the specificity was 68.29%, the sensitivity was 80.00%, and the cut-off value was 4.680. The AUC of Ki67 was 0.772, the 95% CI was 0.616–0.929, the specificity was 87.80%, the sensitivity was 60.00%, and the cut-off value was 8.073. The AUC of the joint detection was 0.855, the 95% CI was 0.734–0.977, the specificity was 82.93%, the sensitivity was 73.33%, and the cut-off value was 0.271 (Table IV and Fig. 1).

Table IV.

Diagnostic value of miR-34a, Ki67, and their combination in NPC-associated mortality.

Index	AUC	95% CI	Specificity (%)	Sensitivity (%)	Youden index (%)	Cut-off
miR-34a	0.785	0.649–0.922	68.29	80.00	48.29	<4.680
Ki67	0.772	0.616–0.929	87.80	60.00	47.80	>8.073
Joint detection	0.855	0.734–0.977	82.93	73.33	52.68	>0.271

NPC, nasopharyngeal carcinoma; AUC, area under curve.

Figure 1.

ROC curves for predicting NPC mortality. ROC, receiver operating characteristic; NPC, nasopharyngeal carcinoma.

Relationship of the expression levels of miR-34a and Ki67 with the 5-year survival of patients

According to the 5-year survival analysis of patients, 56 cases were followed up and no case was lost. All patients were followed up; 15 patients died and 41 survived within 5 years, and the survival rate was 73.21%. According to the median value of miR-34a and Ki67 expression levels, the patients were divided into high- and low-expression groups. The Kaplan-Meier survival analysis revealed that the survival rate of patients with low expression of miR-34a was significantly lower than that of patients with high miR-34a expression, and there was significant difference between the two groups (P<0.001). According to the observation of Ki67 expression in two groups of patients, it was found that the survival of patients with high expression of Ki67 was significantly lower than that of patients with low expression, and there was a significant difference between the two groups (P=0.022) (Fig. 2).

Figure 2.

miR-34a and Ki67 expression levels and the 5-year survival of patients. (A) The 5-year follow-up showed that the overall survival rate was 73.21%. (B) The survival rate of patients with low expression of miR-34a was significantly lower than that of patients with high miR-34a expression, and there was a significant difference between the two groups (P<0.001). (C) According to the observation of Ki67 expression in the two groups of patients, the survival rate of patients with high expression of Ki67 was significantly lower than that of patients with low Ki67 expression, and there was a significant difference between the two groups (P=0.022).

Univariate analysis of patient survival

The clinical data of patients in the survival and deceased group were collected and analyzed by univariate analysis. The results showed that there was no significant difference in age, sex and smoking history between the two groups (P>0.05). However, there were significant differences in differentiation degree, bone metastasis, lymphatic metastasis, local invasion of tumor, TNM staging, miR-34a and Ki67 between the two groups (P<0.05) (Table V).

Table V.

Univariate analysis.

Factors	Survival group (n=41)	Deceased group (n=15)	t/χ2 value	P-value
Age (years)			0.020	0.889
<50	20 (48.78)	7 (46.67)
≥50	21 (51.22)	8 (53.33)
Sex			0.448	0.503
Male	31 (75.61)	10 (66.67)
Female	10 (24.39)	5 (33.33)
Smoking history			0.034	0.854
Yes	18 (43.90)	7 (46.67)
No	23 (56.10)	8 (53.33)
Differentiation			5.130	0.024
Undifferentiated	7 (17.07)	7 (46.67)
Low and moderately differentiated	34 (82.93)	8 (53.33)
Bone metastasis			6.212	0.013
Yes	10 (24.39)	9 (60.00)
No	31 (75.61)	6 (40.00)
Lymphatic metastasis			2.574	0.040
Yes	10 (24.39)	8 (53.33)
No	31 (75.61)	7 (46.67)
Local invasion of tumor			4.743	0.029
Yes	14 (34.15)	10 (66.67)
No	27 (65.85)	5 (33.33)
TNM staging			17.598	<0.001
Stage I–II	31 (75.61)	2 (13.33)
Stage III–IV	10 (24.39)	13 (86.67)
miR-34a	4.942±0.247	4.221±0.212	10.022	<0.001
Ki67	7.643±0.352	8.547±0.427	8.034	<0.001

Multivariate analysis of patient survival

Indices that differed from univariate analysis were incorporated into assignments (Table VI). The results of multivariate Cox regression analysis showed that the degree of differentiation, bone metastasis, lymphatic metastasis and local invasion of tumor were not independent factors for the survival of the patients. TNM staging (OR: 2.561, 95% CI: 0.182–8.598), miR-34a (OR: 0.011, 95% CI: 0.005–0.681) and Ki67 (OR: 0.016, 95% CI: 0.002–2.278) were independent factors in NPC patients (Table VII).

Table VI.

Assignments.

Factors	Assignment
Degree of differentiation	Undifferentiated=1, Lowly and moderately differentiated=0
Bone metastasis	Yes=1, No=0
Lymphatic metastasis	Yes=1, No=0
Local invasion of tumor	Yes=1, No=0
TNM staging	Stage III+IV=1, Stage I+II=0
miR-34a	Data belong to continuous variables using raw data analysis
Ki67	Data belong to continuous variables using raw data analysis
Survival time	Data belong to continuous variables using raw data analysis
Survival status	Death=1, Survival=0

Table VII.

Multivariate analysis.

						Exp(B) 95% CI
Factors	B	S.E.	Wals	Sig.	Exp (B)	Lower limit	Upper limit
TNM staging	−7.925	3.848	4.242	0.039	2.561	0.182	8.598
miR-34a	−13.839	5.838	5.620	0.018	0.011	0.005	0.681
Ki67	4.262	2.140	3.966	0.030	0.016	0.002	2.278

Correlation analysis of miR-34a and Ki67 expression levels in NPC

There was a negative correlation between the expression levels of miR-34a and Ki67 in NPC tissues, as predicted by Pearson's correlation analysis. The expression of Ki67 was found to decrease with the increase of miR-3a expression (r=−0.502, P<0.001) (Fig. 3).

Figure 3.

Correlation analysis of miR-34a and Ki67 expression levels. There was a negative correlation between the expression levels of miR-34a and Ki67 (r=−0.502, P<0.001).

Discussion

NPC is a common malignant tumor in South China and Southeast Asia (16). The specific etiology of NPC is still unclear, however, it has been reported that NPC is related to EBV virus infection, and methylation of the parkin gene may also promote tumors of NPC (17,18). Although NPC patients are sensitive to radiotherapy, the prognosis of NPC patients is still poor due to recurrence and distant metastasis (19). Therefore, finding biomarkers that affect the prognosis of NPC is of great significance to improve the prognosis and survival rate of the patients.

In recent years, there has been a series of studies on microRNAs in NPC. In the study of Sanchez Calle et al (20), a series of biological assays were carried out on NPC cell line in vitro and in vivo, and it was found that miR-130a-3p was downregulated in both NPC tissue and cell line. This result is similar to the result of the present study, that the expression of miR-34a in cancer tissue samples is lower than that in adjacent tissues. Huang et al (21) found that miR-34a inhibited epithelial mesenchymal transformation, invasion and migration of NPC cells induced by TGF-β through directly targeting Smad4. However, the relationship between miR-34a and clinicopathological features and prognosis of NPC has rarely been reported. Therefore, in the present study, the relationship between miR-34a and the clinicopathological features of the patients was further studied and it was found that the expression of miR-34a is significantly associated with bone metastasis and TNM staging. Ki67, used for the evaluation or as a prognostic indicator of breast cancer, gastrointestinal pancreatic neuroendocrine tumo, and other cancers, has been extensively studied in recent years (22,23). In the present study, it was found that Ki67 expression in cancer tissues is significantly higher than that in adjacent tissues. The relationship between Ki67 and clinicopathological features revealed that the expression of Ki67 is significantly associated with lymphatic metastasis and TNM staging. Guan et al (24) detected the expression of Ki67 protein in 90 pairs of NPC and distant normal tissue by immunohistochemical method, and found that the expression of Ki67 in tumor was higher than that in normal tissue, which is similar to our results.

The 5-year survival of patients in this study was followed up. Of the total 56 patients, 15 patients died within 5 years, 41 patients survived, and the survival rate was 73.21%. Patients were divided according to their survival, and the diagnostic value of miR-34a and Ki67 was analyzed by ROC curve analysis. The AUC of miR-34a was 0.785, when the cut-off value was <4.680, and the optimum specificity and sensitivity were 68.29 and 80.00%, respectively. The AUC for Ki67 was 0.772, the optimum specificity and sensitivity were 87.80 and 60.00%, respectively, when the cut-off value was >8.073. These results suggest that miR-34a and Ki67 may be used as predictors of NPC-associated mortality. At the same time, the sensitivity and specificity of the two indexes were significantly different from each other. Through the joint detection of the two indicators, it was found that the area under the joint detection curve was 0.855, and the best specificity and sensitivity were 82.93 and 73.33%, respectively, when the cut-off value was >0.271. These results suggest that the deficiency of the two can be overcome by joint detection. Patients were divided into high- and low-expression groups according to the median values of the two groups, and the Kaplan-Meier survival curves that were drawn. The 5-year survival of patients with low expression of miR-34a was significantly lower than that of patients with high miR-34a expression, and the 5-year survival of patients with high expression of Ki67 was significantly lower than that of patients with low Ki67 expression.

Zhao et al (25), reported on the 3-year overall survival and the high and low Ki67 expression in 45 patients with NPC. The results revealed that the survival rate of patients with high expression of Ki67 was lower, which is similar to our results. In another study, the high expression of Ki67 was considered to be beneficial to anti-radiation, leading to local recurrence and distant metastasis, which would result in poor prognosis (26). By analyzing the patients' clinicopathologic features, it was also found, in the present study, that the patients in stages I and II have lower expression of Ki67 and higher expression of miR-34a compared with those in stage III and IV. Thus, the proportion of patients in the early stage with low expression of Ki67 and high expression of miR-34a was higher, and their survival condition was better. Multivariate Cox regression analysis was also performed and it was found that TNM staging, miR-34a and Ki67 were independent factors for NCP-associated mortality, indicating that TNM staging, miR-34a and Ki67 could be used as clinical indexes to evaluate the prognosis of NPC patients. In addition, the correlation of miR-34a and Ki67 in NPC was detected by Pearson's correlation analysis, and it was found that there is a negative correlation between miR-34a and Ki67 expression levels, which suggests that there might be a close relationship between miR-34a and Ki67, although this was not explored in depth.

Although the relationship among miR-34a, Ki67, clinical pathology and prognosis of NPC was determined, there are still some deficiencies. Therefore further studies are required.

In conclusion, the expression of miR-34a is associated with bone metastasis and TNM staging, the expression of Ki67 is associated with lymphatic metastasis and TNM staging, and there is a negative correlation between miR-34a and Ki67 expression levels. miR-34a and Ki67 can be used as predictors of NPC-associated mortality. miR-34a, Ki67 and TNM staging are associated with prognosis.