| Literature DB >> 31963345 |
Supeecha Kumkate1, Lawan Chanhome2, Tipparat Thiangtrongjit3, Jureeporn Noiphrom4, Panithi Laoungboa2, Orawan Khow4, Taksa Vasaruchapong2, Siravit Sitprija1, Narongsak Chaiyabutr2, Onrapak Reamtong3.
Abstract
The two venomous pit vipers, Trimeresurus macrops and T. hageni, are distributed throughout Thailand, although their abundance varies among different areas. No species-specific antivenom is available for their bite victims, and the only recorded treatment method is a horse antivenom raised against T. albolabris crude venom. To facilitate assessment of the cross-reactivity of heterologous antivenoms, protein profiles of T. macrops and T. hageni venoms were explored using mass-spectrometry-based proteomics. The results show that 185 and 216 proteins were identified from T. macrops and T. hageni venoms, respectively. Two major protein components in T. macrops and T. hageni venoms were snake venom serine protease and metalloproteinase. The toxicity of the venoms on human monocytes and skin fibroblasts was analyzed, and both showed a greater cytotoxic effect on fibroblasts than monocytic cells, with toxicity occurring in a dose-dependent rather than a time-dependent manner. Exploring the protein composition of snake venom leads to a better understanding of the envenoming of prey. Moreover, knowledge of pit viper venomics facilitates the selection of the optimum heterologous antivenoms for treating bite victims.Entities:
Keywords: Trimeresurus hageni; Trimeresurus macrops; U937 monocytes; cytotoxicity; fibroblasts; pit vipers; snake venom proteomics
Mesh:
Substances:
Year: 2020 PMID: 31963345 PMCID: PMC7020458 DOI: 10.3390/toxins12010054
Source DB: PubMed Journal: Toxins (Basel) ISSN: 2072-6651 Impact factor: 4.546
Figure 1Two prominent species of Trimeresurus snakes in Thailand. Adult large-eyed pit viper (T. macrops) with its noticeably large eyes (a) and the Hagen’s pit viper (T. hageni) perching on a tree branch (b).
Figure 2Coomassie blue-stained 12% sodium dodecyl sulfate polyacrylamide gel electrophoresis of T. macrops and T. hageni venoms (30 µg) under reducing conditions.
Gene ontology classification of Trimeresurus macrops and T. hageni crude venom proteins.
| Gene Ontology | % of Protein Components | |
|---|---|---|
|
|
| |
| Molecular Function | ||
| binding (GO:0005488) | 12.5 | 33.3 |
| catalytic activity (GO:0003824) | 75.0 | 44.4 |
| structural molecule activity (GO:0005198) | 12.5 | - |
| molecular function regulator (GO:0098772) | - | 22.2 |
| Biological Process | ||
| biological regulation (GO:0065007) | 36.4 | 20.0 |
| cellular process (GO:0009987) | 27.3 | 26.7 |
| metabolic process (GO:0008152) | 9.1 | 6.7 |
| rhythmic process (GO:0048511) | 27.3 | 20.0 |
| immune system process (GO:0002376) | - | 6.7 |
| response to stimulus (GO:0050896) | - | 6.7 |
| localization (GO:0051179) | - | 13.3 |
| Cellular component | ||
| cell (GO:0005623) | 25.0 | 33.3 |
| extracellular region (GO:0005576) | 12.5 | 16.7 |
| membrane (GO:0016020) | 12.5 | - |
| organelle (GO:0043226) | 37.5 | 50.0 |
| protein-containing complex (GO:0032991) | 12.5 | - |
Figure 3Proteome classification of T. macrops (blue) and T. hageni (orange) venoms; proteomes were classified according to common functions of snake venom.
Top-20 unique proteins identified in T. macrops crude venom.
| No. | Accession No. | Protein | Family | Score | M.W. | No. of Peptide | % Sequence Coverage | pI | emPAI |
|---|---|---|---|---|---|---|---|---|---|
| 1 | gi|299493 | Thrombin-like proteinase | Protease | 99 | 2737 | 2 | 54.2 | 4.31 | 4.69 |
| 2 | gi|46395675 | Cysteine-rich venom protein tripurin | Toxin activity | 86 | 3971 | 2 | 33.3 | 9.19 | 2.76 |
| 3 | gi|13959432 | Acidic phospholipase A2 5 | Toxin activity | 442 | 13,870 | 4 | 27.9 | 4.72 | 2.74 |
| 4 | gi|67462321 | Disintegrin trigramin-gamma | Protease | 111 | 7568 | 2 | 28.8 | 4.61 | 2.17 |
| 5 | gi|697351484 | Chain A, crystal structure of an acidic Pla2 | Toxin activity | 443 | 13,710 | 4 | 36.4 | 4.81 | 2.03 |
| 6 | gi|60593434 | Chain A, crystal structure of stecrisp | Toxin activity | 238 | 25,112 | 4 | 18.1 | 5.53 | 1.12 |
| 7 | gi|20177994 | Acidic phospholipase A2 6 | Toxin activity | 146 | 15,712 | 3 | 21 | 4.72 | 0.79 |
| 10 | gi|538259813 | Galactose binding lectin, partial | CHO binding | 79 | 17,654 | 3 | 23 | 5.72 | 0.69 |
| 11 | gi|3552036 | Pallase | Protease | 151 | 26,162 | 3 | 19.4 | 5.89 | 0.62 |
| 12 | gi|344268956 | Phorbol-12-myristate-13-acetate-induced protein 1 | Apoptotic process | 36 | 6008 | 1 | 12.7 | 10.06 | 0.60 |
| 14 | gi|13959429 | Basic phospholipase A2 2 | Toxin activity | 130 | 7813 | 1 | 14.3 | 8.49 | 0.45 |
| 15 | gi|82094948 | Bradykinin-releasing enzyme KR-E-1 | Protease | 102 | 25,335 | 3 | 13.2 | 4.82 | 0.45 |
| 16 | gi|123894851 | Snake venom metalloproteinase | Protease | 364 | 68,673 | 7 | 12.2 | 6.4 | 0.39 |
| 17 | gi|13959619 | Snake venom serine protease 2B | Protease | 71 | 28,915 | 3 | 17.3 | 5.54 | 0.39 |
| 18 | gi|538259847 | 5’-nucleotidase | Nucleotidase activity | 203 | 57,055 | 7 | 15.1 | 8.27 | 0.32 |
| 19 | gi|32469800 | Thrombin-like enzyme contortrixobin | Protease | 102 | 25,396 | 3 | 13.2 | 4.95 | 0.28 |
| 20 | gi|143681919 | Thrombin-like enzyme kangshuanmei | Protease | 99 | 26,415 | 2 | 14.8 | 8.27 | 0.27 |
Top-20 unique identified proteins from T. hageni crude venom.
| No. | Accession No. | Protein | Family | Score | M.W. | No. of Peptides | %Sequence Coverage | pI | emPAI |
|---|---|---|---|---|---|---|---|---|---|
| 1 | gi|82130933 | Snaclec coagulation factor IX-binding protein subunit A | Toxin activity | 145 | 14,631 | 4 | 31.8 | 4.92 | 1.31 |
| 2 | gi|67462321 | Platelet aggregation activation inhibitor | Protease | 162 | 7568 | 2 | 28.8 | 4.61 | 1.16 |
| 3 | gi|60593434 | Chain A, crystal structure of stecrisp | Toxin activity | 174 | 25,112 | 5 | 21.7 | 5.53 | 1.12 |
| 4 | gi|3914268 | Acidic phospholipase A2 2 | Toxin activity | 155 | 13,784 | 4 | 38.5 | 4.95 | 0.94 |
| 5 | gi|538259791 | C-type lectin factor IX/X binding protein A subunit, | CHO binding | 122 | 14,688 | 3 | 30 | 4.92 | 0.87 |
| 6 | gi|32469800 | Thrombin-like enzyme contortrixobin | Protease | 450 | 25,396 | 6 | 18.4 | 4.95 | 0.85 |
| 7 | gi|39655009 | Chain A, crystal structure of a platelet agglutination factor isolated from the venom of Taiwan Habu | Protease | 227 | 15,718 | 5 | 26.7 | 5.09 | 0.79 |
| 8 | gi|126130 | Galactose-specific lectin | CHO binding | 55 | 16,281 | 4 | 31.1 | 5.54 | 0.76 |
| 9 | gi|565235162 | hypothetical protein L345_18387, partial | Unknown | 36 | 5242 | 1 | 37.5 | 3.63 | 0.7 |
| 10 | gi|13959617 | Snake venom serine protease 1 | Protease | 150 | 27,923 | 6 | 22.5 | 5.66 | 0.57 |
| 11 | gi|13959432 | Acidic phospholipase A2 5 | Toxin activity | 65 | 13,870 | 2 | 11.5 | 4.72 | 0.55 |
| 12 | gi|82201344 | Basic phospholipase A2 homolog Ts-R6 | Toxin activity | 56 | 15,477 | 5 | 24.8 | 8.5 | 0.49 |
| 13 | gi|129417 | Acidic phospholipase A2 1 | Toxin activity | 62 | 15,524 | 2 | 10.1 | 6.54 | 0.48 |
| 14 | gi|356581537 | Beta-defensin-like protein 10 | Chemokine receptor binding | 14 | 7492 | 1 | 9 | 9.73 | 0.48 |
| 15 | gi|59727030 | D1E6b phospholipase A2 | Toxin activity | 85 | 15,959 | 2 | 10.1 | 4.79 | 0.47 |
| 16 | gi|360797 | Flavoxobin | Protease | 158 | 25,725 | 5 | 13.6 | 5.2 | 0.44 |
| 17 | gi|538259853 | Phosphodiesterase | Magnesium binding | 128 | 96,526 | 15 | 17 | 8.03 | 0.44 |
| 18 | gi|676251620 | Neurofibromin, | Phosphatid-ylcholine binding | 30 | 7991 | 1 | 8.6 | 8.66 | 0.44 |
| 19 | gi|538259847 | 5ʹ-nucleotidase, | Nucleotidase activity | 177 | 57,055 | 10 | 19.5 | 8.27 | 0.4 |
| 20 | gi|632991866 | Transmembrane protein 184B-like | Unknown | 52 | 9150 | 1 | 13.1 | 5.65 | 0.37 |
Figure 4Cytotoxicity of Trimeresurus macrops and T. hageni venoms on human monocytic cells determined by 3-(4,5-dimethyl thiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT) assay. U937 cells were treated with 0 to 3 mg/mL T. macrops venom for 48 (a) and 72 h (b) or with 0 to 3 mg/mL of T. hageni venom for 48 (c) and 72 h (d). Percentage U937 cell viability of venom-treated compared with non-venom treated cells (control). Data represent the mean ± standard error of mean (SEM) from three independent experiments, ** p < 0.01, *** p < 0.001.
Figure 5Cytotoxicity of Trimeresurus macrops and T. hageni venoms on human skin fibroblasts determined by 3-(4,5-dimethyl thiazol-2-yl)-2,5-diphenyl tetrazolium bromide assay. CRL-1474 skin fibroblasts were treated with 0 to 0.3 mg/mL T. macrops venom for 48 (a) and 72 h (b) or with 0 to 0.5 mg/mL T. hageni venom for 48 (c) and 72 h (d). Percentage CRL-1474 fibroblast cell viability of venom-treated compared with non-venom treated cells (control). Data represent the mean ± standard error of mean (SEM) from two independent experiments, * p < 0.05, ** p < 0.01 and *** p < 0.001.