Literature DB >> 31961285

Hymenobacter sediminis sp. nov., isolated from lake sediment.

Chong Wang1, Bang-Tao Liu1, Rui Zhang1, Chun-Li Liu1, Zong-Jun Du1,2.   

Abstract

A Gram-stain-negative, facultatively aerobic, rod-shaped, motile by gliding and pink-pigmented bacterial strain, designated ELS1360T, was isolated from a lake sediment sample collected in Inner Mongolia, PR China. Strain ELS1360T grew optimally at 33 °C, at pH 6.5-7.0 and without NaCl. Strain ELS1360T exhibited 97.3, 97.1 and 96.9 % 16S rRNA gene sequence similarities to Hymenobacter aquatilis HMF3095T, Hymenobacter luteus JCM 30328T and Hymenobacter latericoloratus JCM 30327T, respectively, and 90.4-96.9 % to other members of the genus Hymenobacter. Results of phylogenetic analysis based on 16S rRNA gene sequences showed that strain ELS1360T belonged to the genus Hymenobacter and clustered with H. luteus JCM 30328T and H. latericoloratus JCM 30327T. The predominant cellular fatty acids were iso-C15:0, summed feature 3 and C16:1ω5c. Strain ELS1360T contained MK-7 as the sole menaquinone. The major polar lipids contained phosphatidylethanolamine and two unidentified lipids. The genomic DNA G+C content of strain ELS1360T was 57.1 mol%. Based on the results of our phylogenetic, phenotypic, genotypic and chemotaxonomic analyses, it is concluded that strain ELS1360T represents a novel species within the genus Hymenobacter, for which the name Hymenobacter sediminis sp. nov. is proposed. The type strain is ELS1360T (=KCTC 62449T=MCCC 1H00319T).

Entities:  

Keywords:  16S rRNA gene; Hymenobacter; phylogenetic analysis

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Year:  2020        PMID: 31961285     DOI: 10.1099/ijsem.0.003990

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Hymenobacter telluris sp. nov., isolated from soil in South Korea.

Authors:  Tuvshinzaya Damdintogtokh; Yuna Park; Soohyun Maeng; Hye Jin Oh; Minji Bang; Young Koung Lee; Jaesung Oh; Jaewoo Bai; Myung Kyum Kim
Journal:  Arch Microbiol       Date:  2022-01-04       Impact factor: 2.552

2.  Hymenobacter translucens sp. nov. and Hymenobacter pini sp. nov. isolated from soil.

Authors:  Minji Bang; Myung Kyum Kim; Hee-Young Jung
Journal:  Arch Microbiol       Date:  2022-06-06       Impact factor: 2.667

3.  Hymenobacter properus sp. nov., Hymenobacter ruricola sp. nov., and Hymenobacter jeongseonensis sp. nov., three new species isolated from mountain and beach soil in South Korea.

Authors:  Minji Bang; Sathiyaraj Srinivasan; Gayathri Sathiyaraj
Journal:  Antonie Van Leeuwenhoek       Date:  2021-05-27       Impact factor: 2.271

  3 in total

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