Literature DB >> 31957436

Counterion-Mediated Crossing of the Cyanine Limit in Crystals and Fluid Solution: Bond Length Alternation and Spectral Broadening Unveiled by Quantum Chemistry.

Morteza Eskandari1,2, Juan Carlos Roldao1, Javier Cerezo3, Begoña Milián-Medina4, Johannes Gierschner1.   

Abstract

Absorption spectra of cyanine⊕·Br⊖ salts show a remarkable solvent dependence in non/polar solvents, exhibiting narrow, sharp band shapes in dichloromethane but broad features in toluene; this change was attributed to ion pair association, stabilizing an asymmetric dipolar structure, similar to the situation in the crystal (Bouit, P.-A., et al. J. Am. Chem. Soc. 2010, 132, 4328). Our density functional theory (DFT)-based quantum mechanics/molecular mechanics (QM/MM) calculations of the crystals evidence the crucial role of specific asymmetric anion positioning on the lowering of the symmetry. Molecular dynamics (MD) simulations prove the ion pair association in nonpolar solvents. Time-dependent DFT vibronic calculations in toluene show that ion pairing indeed stabilizes an asymmetric dipolar structure in the electronic ground state. This largely broadens the absorption spectrum in very reasonable agreement with experiment, while the principal pattern of vibrational modes is retained. The current findings allow us to establish a unified picture of the symmetry breaking of polymethine dyes in fluid solution.

Entities:  

Year:  2020        PMID: 31957436     DOI: 10.1021/jacs.9b10686

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  3 in total

1.  Counterion Pairing Effects on a Flavylium Heptamethine Dye.

Authors:  Monica Pengshung; Emily D Cosco; Zhumin Zhang; Ellen M Sletten
Journal:  Photochem Photobiol       Date:  2021-12-02       Impact factor: 3.421

Review 2.  Far-Red Absorbing Rhodopsins, Insights From Heterodimeric Rhodopsin-Cyclases.

Authors:  Matthias Broser
Journal:  Front Mol Biosci       Date:  2022-01-21

3.  Unspecified verticality of Franck-Condon transitions, absorption and emission spectra of cyanine dyes, and a classically inspired approximation.

Authors:  Joseph D Alia; Joseph A Flack
Journal:  RSC Adv       Date:  2020-11-26       Impact factor: 4.036

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.