Literature DB >> 31953204

Expanding the chemical diversity through microorganisms co-culture: Current status and outlook.

Divya Arora1, Prasoon Gupta2, Sundeep Jaglan3, Catherine Roullier4, Olivier Grovel4, Samuel Bertrand5.   

Abstract

Natural products (NPs) are considered as a cornerstone for the generation of bioactive leads in drug discovery programs. However, one of the major limitations of NP drug discovery program is "rediscovery" of known compounds, thereby hindering the rate of drug discovery efficiency. Therefore, in recent years, to overcome these limitations, a great deal of attention has been drawn towards understanding the role of microorganisms' co-culture in inducing novel chemical entities. Such induction could be related to activation of genes which might be silent or expressed at very low levels (below detection limit) in pure-strain cultures under normal laboratory conditions. In this review, chemical diversity of compounds isolated from microbial co-cultures, is discussed. For this purpose, chemodiversity has been represented as a chemical-structure network based on the "Tanimoto Structural Similarity Index". This highlights the huge structural diversity induced by microbial co-culture. In addition, the current trends in microbial co-culture research are highlighted. Finally, the current challenges (1 - induction monitoring, 2 - reproducibility, 3 - growth time effect and 4 - up-scaling for isolation purposes) are discussed. The information in this review will support researchers to design microbial co-culture strategies for future research efforts. In addition, guidelines for co-culture induction reporting are also provided to strengthen future reporting in this NP field.
Copyright © 2020 Elsevier Inc. All rights reserved.

Keywords:  Chemical diversity; Induction; Microbial co-culture

Mesh:

Substances:

Year:  2020        PMID: 31953204     DOI: 10.1016/j.biotechadv.2020.107521

Source DB:  PubMed          Journal:  Biotechnol Adv        ISSN: 0734-9750            Impact factor:   14.227


  14 in total

1.  Antibacterial diphenyl ether production induced by co-culture of Aspergillus nidulans and Aspergillus fumigatus.

Authors:  Akihiro Ninomiya; Syun-Ichi Urayama; Daisuke Hagiwara
Journal:  Appl Microbiol Biotechnol       Date:  2022-05-21       Impact factor: 4.813

2.  Community composition and trophic mode diversity of fungi associated with fruiting body of medicinal Sanghuangporus vaninii.

Authors:  Yanjun Ma; Weiqian Gao; Fan Zhang; Xuetai Zhu; Weibao Kong; Shiquan Niu; Kun Gao; Hongqin Yang
Journal:  BMC Microbiol       Date:  2022-10-19       Impact factor: 4.465

Review 3.  Discovery of novel secondary metabolites encoded in actinomycete genomes through coculture.

Authors:  Ji Hun Kim; Namil Lee; Soonkyu Hwang; Woori Kim; Yongjae Lee; Suhyung Cho; Bernhard O Palsson; Byung-Kwan Cho
Journal:  J Ind Microbiol Biotechnol       Date:  2021-06-04       Impact factor: 4.258

4.  Insights into the Chemical Diversity of Selected Fungi from the Tza Itzá Cenote of the Yucatan Peninsula.

Authors:  Carlos A Fajardo-Hernández; Firoz Shah Tuglak Khan; Laura Flores-Bocanegra; Alejandra Prieto-Davó; Baojie Wan; Rui Ma; Mallique Qader; Rodrigo Villanueva-Silva; Anahí Martínez-Cárdenas; Marian A López-Lobato; Shabnam Hematian; Scott G Franzblau; Huzefa A Raja; Rodolfo García-Contreras; Mario Figueroa
Journal:  ACS Omega       Date:  2022-03-28

5.  Quantitative Morphological Analysis of Filamentous Microorganisms in Cocultures and Monocultures: Aspergillus terreus and Streptomyces rimosus Warfare in Bioreactors.

Authors:  Anna Ścigaczewska; Tomasz Boruta; Marcin Bizukojć
Journal:  Biomolecules       Date:  2021-11-22

Review 6.  A bioprocess perspective on the production of secondary metabolites by Streptomyces in submerged co-cultures.

Authors:  Tomasz Boruta
Journal:  World J Microbiol Biotechnol       Date:  2021-09-07       Impact factor: 3.312

7.  Wheldone: Characterization of a Unique Scaffold from the Coculture of Aspergillus fischeri and Xylaria flabelliformis.

Authors:  Sonja L Knowles; Huzefa A Raja; Israa H Isawi; Laura Flores-Bocanegra; Patricia H Reggio; Cedric J Pearce; Joanna E Burdette; Antonis Rokas; Nicholas H Oberlies
Journal:  Org Lett       Date:  2020-02-25       Impact factor: 6.005

8.  Dynamics of microbial competition, commensalism, and cooperation and its implications for coculture and microbiome engineering.

Authors:  Peng Xu
Journal:  Biotechnol Bioeng       Date:  2020-09-21       Impact factor: 4.530

9.  The signaling role of extracellular ATP in co-culture of Shiraia sp. S9 and Pseudomonas fulva SB1 for enhancing hypocrellin A production.

Authors:  Xin Ping Li; Lu Lu Zhou; Yan Hua Guo; Jian Wen Wang
Journal:  Microb Cell Fact       Date:  2021-07-23       Impact factor: 5.328

10.  Comparative Metabolomics Reveals Fungal Conversion of Co-Existing Bacterial Metabolites within a Synthetic Aspergillus-Streptomyces Community.

Authors:  Yutong Shi; Yihan Ma; Jihua Wei; Yichao Ge; Wei Jiang; Shan He; Xiaodan Wu; Xiaoqin Zhang; Bin Wu
Journal:  Mar Drugs       Date:  2021-09-19       Impact factor: 5.118

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