Literature DB >> 31950648

Pulsed Dipolar EPR Spectroscopy and Metal Ions: Methodology and Biological Applications.

Dinar Abdullin1, Olav Schiemann1.   

Abstract

Pulsed dipolar electron paramagnetic resonance spectroscopy (PDS) is a valuable method for determining biomolecular structures and their conformational changes during function. Often, this method is applied to paramagnetic metal ions that are either intrinsic co-factors of biomolecules or introduced into biomolecules as spin labels. Here, the key achievements and the remaining challenges of PDS on metal ions are summarized and critically discussed. The first part of the Review describes the methodology of PDS experiments and the related data analysis for each of the biologically relevant paramagnetic metal centers. The second part highlights applications with the aim to give an idea about what kind of questions from structural biology can be answered by PDS-based distance measurements involving metal centers.
© 2020 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA.

Entities:  

Keywords:  paramagnetic metal ions; pulse sequences; pulsed dipolar EPR spectroscopy; spin labels; structural biology

Mesh:

Substances:

Year:  2020        PMID: 31950648     DOI: 10.1002/cplu.201900705

Source DB:  PubMed          Journal:  Chempluschem        ISSN: 2192-6506            Impact factor:   2.863


  8 in total

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2.  Spin Labeling of Long RNAs Via Click Reaction and Enzymatic Ligation.

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4.  DEER Data Analysis Software: A Comparative Guide.

Authors:  Hannah Russell; Robyn Cura; Janet E Lovett
Journal:  Front Mol Biosci       Date:  2022-06-01

5.  SLIM: A Short-Linked, Highly Redox-Stable Trityl Label for High-Sensitivity In-Cell EPR Distance Measurements.

Authors:  Nico Fleck; Caspar A Heubach; Tobias Hett; Florian R Haege; Pawel P Bawol; Helmut Baltruschat; Olav Schiemann
Journal:  Angew Chem Int Ed Engl       Date:  2020-04-30       Impact factor: 15.336

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Journal:  J Am Chem Soc       Date:  2020-09-03       Impact factor: 15.419

Review 7.  Studies of transmembrane peptides by pulse dipolar spectroscopy with semi-rigid TOPP spin labels.

Authors:  Igor Tkach; Ulf Diederichsen; Marina Bennati
Journal:  Eur Biophys J       Date:  2021-02-28       Impact factor: 1.733

8.  DEER and RIDME Measurements of the Nitroxide-Spin Labelled Copper-Bound Amine Oxidase Homodimer from Arthrobacter Globiformis.

Authors:  Hannah Russell; Rachel Stewart; Christopher Prior; Vasily S Oganesyan; Thembaninkosi G Gaule; Janet E Lovett
Journal:  Appl Magn Reson       Date:  2021-03-29       Impact factor: 0.831

  8 in total

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