Literature DB >> 31950302

Using DICOM Metadata for Radiological Image Series Categorization: a Feasibility Study on Large Clinical Brain MRI Datasets.

Romane Gauriau1, Christopher Bridge2, Lina Chen2, Felipe Kitamura3, Neil A Tenenholtz2, John E Kirsch4, Katherine P Andriole2,5, Mark H Michalski2,3, Bernardo C Bizzo2,3,4.   

Abstract

The growing interest in machine learning (ML) in healthcare is driven by the promise of improved patient care. However, how many ML algorithms are currently being used in clinical practice? While the technology is present, as demonstrated in a variety of commercial products, clinical integration is hampered by a lack of infrastructure, processes, and tools. In particular, automating the selection of relevant series for a particular algorithm remains challenging. In this work, we propose a methodology to automate the identification of brain MRI sequences so that we can automatically route the relevant inputs for further image-related algorithms. The method relies on metadata required by the Digital Imaging and Communications in Medicine (DICOM) standard, resulting in generalizability and high efficiency (less than 0.4 ms/series). To support our claims, we test our approach on two large brain MRI datasets (40,000 studies in total) from two different institutions on two different continents. We demonstrate high levels of accuracy (ranging from 97.4 to 99.96%) and generalizability across the institutions. Given the complexity and variability of brain MRI protocols, we are confident that similar techniques could be applied to other forms of radiological imaging.

Entities:  

Keywords:  Automation; DICOM; Machine learning; Series categorization; Workflow

Year:  2020        PMID: 31950302      PMCID: PMC7256138          DOI: 10.1007/s10278-019-00308-x

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.056


  19 in total

1.  Towards content-based image retrieval in a HIS-integrated PACS.

Authors:  C Le Bozec; E Zapletal; M C Jaulent; D Heudes; P Degoulet
Journal:  Proc AMIA Symp       Date:  2000

2.  Content-based ultrasound image retrieval using a coarse to fine approach.

Authors:  Dong-Min Kwak; Bum-Soo Kim; Ock-Kyung Yoon; Chul-Hyung Park; Jong-Un Won; Kil-Houm Park
Journal:  Ann N Y Acad Sci       Date:  2002-12       Impact factor: 5.691

3.  Integrating content-based visual access methods into a medical case database.

Authors:  Henning Müller; Antoine Rosset; Jean-Paul Vallée; Antoine Geissbuhler
Journal:  Stud Health Technol Inform       Date:  2003

Review 4.  Content-based medical image retrieval: a survey of applications to multidimensional and multimodality data.

Authors:  Ashnil Kumar; Jinman Kim; Weidong Cai; Michael Fulham; Dagan Feng
Journal:  J Digit Imaging       Date:  2013-12       Impact factor: 4.056

5.  A Road Map for Translational Research on Artificial Intelligence in Medical Imaging: From the 2018 National Institutes of Health/RSNA/ACR/The Academy Workshop.

Authors:  Bibb Allen; Steven E Seltzer; Curtis P Langlotz; Keith P Dreyer; Ronald M Summers; Nicholas Petrick; Danica Marinac-Dabic; Marisa Cruz; Tarik K Alkasab; Robert J Hanisch; Wendy J Nilsen; Judy Burleson; Kevin Lyman; Krishna Kandarpa
Journal:  J Am Coll Radiol       Date:  2019-05-28       Impact factor: 5.532

6.  An Ensemble of Fine-Tuned Convolutional Neural Networks for Medical Image Classification.

Authors:  Ashnil Kumar; Jinman Kim; David Lyndon; Michael Fulham; Dagan Feng
Journal:  IEEE J Biomed Health Inform       Date:  2016-12-05       Impact factor: 5.772

Review 7.  Current Applications and Future Impact of Machine Learning in Radiology.

Authors:  Garry Choy; Omid Khalilzadeh; Mark Michalski; Synho Do; Anthony E Samir; Oleg S Pianykh; J Raymond Geis; Pari V Pandharipande; James A Brink; Keith J Dreyer
Journal:  Radiology       Date:  2018-06-26       Impact factor: 11.105

8.  Using Deep Learning Algorithms to Automatically Identify the Brain MRI Contrast: Implications for Managing Large Databases.

Authors:  Ricardo Pizarro; Haz-Edine Assemlal; Dante De Nigris; Colm Elliott; Samson Antel; Douglas Arnold; Amir Shmuel
Journal:  Neuroinformatics       Date:  2019-01

9.  Dicoogle, a PACS featuring profiled content based image retrieval.

Authors:  Frederico Valente; Carlos Costa; Augusto Silva
Journal:  PLoS One       Date:  2013-05-06       Impact factor: 3.240

10.  The rise and fall of machine learning methods in biomedical research.

Authors:  Hashem Koohy
Journal:  F1000Res       Date:  2017-11-10
View more
  4 in total

1.  A Deep Learning-based Model for Detecting Abnormalities on Brain MR Images for Triaging: Preliminary Results from a Multisite Experience.

Authors:  Romane Gauriau; Bernardo C Bizzo; Felipe C Kitamura; Osvaldo Landi Junior; Suely F Ferraciolli; Fabiola B C Macruz; Tiago A Sanchez; Marcio R T Garcia; Leonardo M Vedolin; Romeu C Domingues; Emerson L Gasparetto; Katherine P Andriole
Journal:  Radiol Artif Intell       Date:  2021-04-21

2.  Development and clinical application of a deep learning model to identify acute infarct on magnetic resonance imaging.

Authors:  Christopher P Bridge; Bernardo C Bizzo; James M Hillis; John K Chin; Donnella S Comeau; Romane Gauriau; Fabiola Macruz; Jayashri Pawar; Flavia T C Noro; Elshaimaa Sharaf; Marcelo Straus Takahashi; Bradley Wright; John F Kalafut; Katherine P Andriole; Stuart R Pomerantz; Stefano Pedemonte; R Gilberto González
Journal:  Sci Rep       Date:  2022-02-09       Impact factor: 4.379

3.  Deep multi-task learning and random forest for series classification by pulse sequence type and orientation.

Authors:  Noah Kasmanoff; Matthew D Lee; Narges Razavian; Yvonne W Lui
Journal:  Neuroradiology       Date:  2022-07-30       Impact factor: 2.995

4.  Development and Validation of the Radiology Common Data Model (R-CDM) for the International Standardization of Medical Imaging Data.

Authors:  ChulHyoung Park; Seng Chan You; Hokyun Jeon; Chang Won Jeong; Jin Wook Choi; Rae Woong Park
Journal:  Yonsei Med J       Date:  2022-01       Impact factor: 2.759

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.