Literature DB >> 31946514

Network Activity Due to Topographic Organization of Schaffer Collaterals in a Large-Scale Model of Rat CA1.

Gene J Yu, Zhicheng Feng, Theodore W Berger.   

Abstract

Connectivity between neural regions, particularly in the hippocampus, is seldom all-to-all or random, yet it is the predominant method by which connectivity is implemented in most models of neuronal networks. We have been developing a computational platform for simulating the trisynaptic circuit of rat hippocampus with which we have constructed a large-scale, biologically-realistic, spiking neuronal network model of the entorhinal-dentate-CA3 system. Using the model, we had demonstrated a non-trivial effect of topographic connectivity on network dynamics and function. In this work, we detail the introduction of the CA1 subregion to the large-scale model. Using anatomical data, we constrained the distribution of axon collaterals, i.e., Schaffer collaterals, projected from CA3 to CA1 and preserved the topographic organization of the projections. Using a simplified multi-compartmental model of CA1 pyramidal cells and a single compartment model of CA1 parvalbumin basket cells, that were connected with disynaptic feedforward inhibition and feedback inhibition, we demonstrate the network activity of the CA1 network given a topographic organization of Schaffer collaterals. From this introduction of CA1 to the large-scale model, we can then observe the successive transformation of spatio-temporal, spiking neural activity as it propagates through the trisynaptic circuit.

Entities:  

Year:  2019        PMID: 31946514      PMCID: PMC7042972          DOI: 10.1109/EMBC.2019.8856799

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  16 in total

1.  Total number and distribution of inhibitory and excitatory synapses on hippocampal CA1 pyramidal cells.

Authors:  M Megías; Z Emri; T F Freund; A I Gulyás
Journal:  Neuroscience       Date:  2001       Impact factor: 3.590

2.  Unbiased stereological estimation of the total number of neurons in thesubdivisions of the rat hippocampus using the optical fractionator.

Authors:  M J West; L Slomianka; H J Gundersen
Journal:  Anat Rec       Date:  1991-12

3.  Axonal Anatomy Optimizes Spatial Encoding in the Rat Entorhinal-Dentate System: A Computational Study.

Authors:  Gene J Yu; Jean-Marie C Bouteiller; Dong Song; Theodore W Berger
Journal:  IEEE Trans Biomed Eng       Date:  2019-01-21       Impact factor: 4.538

4.  Non-homogeneous stereological properties of the rat hippocampus from high-resolution 3D serial reconstruction of thin histological sections.

Authors:  D Ropireddy; S E Bachus; G A Ascoli
Journal:  Neuroscience       Date:  2012-01-04       Impact factor: 3.590

5.  Decoding Position to Analyze Spatial Information Encoding in a Large-Scale Neuronal Network Model of Rat Dentate Gyrus.

Authors:  Gene J Yu; Jean-Marie C Bouteiller; Dong Song; Theodore W Berger
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2018-07

6.  A Million-Plus Neuron Model of the Hippocampal Dentate Gyrus: Critical Role for Topography in Determining Spatiotemporal Network Dynamics.

Authors:  Phillip J Hendrickson; Gene J Yu; Dong Song; Theodore W Berger
Journal:  IEEE Trans Biomed Eng       Date:  2015-06-16       Impact factor: 4.538

7.  Topography-dependent spatio-temporal correlations in the entorhinal-dentate-CA3 circuit in a large-scale computational model of the Rat Hippocampus.

Authors:  Gene J Yu; Phillip J Hendrickson; Dong Song; Theodore W Berger
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2015

8.  Hippocampal - diencephalic - cingulate networks for memory and emotion: An anatomical guide.

Authors:  Emma J Bubb; Lisa Kinnavane; John P Aggleton
Journal:  Brain Neurosci Adv       Date:  2017-08-04

9.  Fast and accurate low-dimensional reduction of biophysically detailed neuron models.

Authors:  Addolorata Marasco; Alessandro Limongiello; Michele Migliore
Journal:  Sci Rep       Date:  2012-12-05       Impact factor: 4.379

10.  Interactions between Inhibitory Interneurons and Excitatory Associational Circuitry in Determining Spatio-Temporal Dynamics of Hippocampal Dentate Granule Cells: A Large-Scale Computational Study.

Authors:  Phillip J Hendrickson; Gene J Yu; Dong Song; Theodore W Berger
Journal:  Front Syst Neurosci       Date:  2015-11-17
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.