| Literature DB >> 31942417 |
L Zhao1, L-Y Zou2, B-F Cheng3, X-J Yu4, J-H Zou5, W Han6.
Abstract
Most studies in the field of CHRNA5-A3 and CHRNB3-A6 have only focused on lung cancer risk; however, the associations with chronic obstructive pulmonary disease (COPD) risk and smoking cessation is less understood, particularly in the Chinese male population. In this study, samples from 823 male patients with COPD (non smokers: 416; still smoking: 407) and 435 smoking male healthy control subjects were performed with DNA extraction and single nucleotide polymorphism (SNP) genotyping. We studied three SNPS in two genes, namely rs667282 and rs3743073 in CHRNA5-A3 and rs4950 in CHRNB3-A6, and their distributions in the three groups are not statistically different (p >0.05). We grouped COPD patients according to whether they had successfully quit smoking, the CT genotype of rs667282 demonstrated association with an increased rate of successful smoking cessation compared with the TT genotype [adjusted odds ratio (OR) = 0.54, 95% confidence interval (95% CI) = 0.37-0.7, p <0.001); rs4950 AG genotypes were distinctly associated with increased rates of successful smoking cessation (adjusted OR = 0.55, 95% CI = 0.40-0.76, p <0.001). The effect is significant under the assumption of an over dominant mode of inheritance (adjusted OR = 0.58, 95% CI = 0.43 to 0.79, p <0.001). No significant difference in rs3743073 was found (p >0.05). Our findings confirmed the hypothesis that CHRNA5-A3 and CHRNB3-A6 variation are not associated with the risk of COPD. We found CHRNA5-A3 and CHRNB3-A6 were significantly associated with successful smoking cessation in smoking COPD patients.Entities:
Keywords: Chronic obstructive pulmonary disease (COPD); Single nucleotide polymorphisms (SNPs); Smoking cessation
Year: 2019 PMID: 31942417 PMCID: PMC6956637 DOI: 10.2478/bjmg-2019-0018
Source DB: PubMed Journal: Balkan J Med Genet ISSN: 1311-0160 Impact factor: 0.519
The demographic characteristics of the studied subjects. (Results are presented as mean±SD.)
| Characteristics | Male Smokers | Male COPD Patients | ||||
|---|---|---|---|---|---|---|
| COPD Patients ( | Healthy Controls ( | Still Smoking ( | Non Smoking ( | |||
| Age (years) | 67.6±11.1 | 57.1±13.2 | <0.001 | 67.6±11.1 | 70.7±8.2 | <0.001 |
| BMI (years) | 21.5±3.5 | 21.8±3.4 | 0.13 | 21.0±2.9 | 28.8±3.1 | 0.220 |
| Smoking Cigarettes/variables: day | 27.0±15.1 | 19.7±11.7 | <0.001 | 27.0±15.1 | 21.2±9.7 | <0.001 |
| Years smoking | 40.2±9.9 | 31.4±14.7 | <0.001 | 40.2±9.9 | 34.9±13.4 | <0.001 |
| Post-FEV1 predicted | 58.0±5.6 | 104.7±9.6 | <0.001 | 58.0±5.6 | 59.1±16.2 | 0.0352 |
| Post-FEV1/FVC ratio | 52.7±8.7 | 78.5±5.6 | <0.001 | 52.7±8.7 | 53.9±8.6 | 0.056 |
| GOLD status: | ||||||
| Stage I (mild) | 114 | – | – | 114 | 133 | – |
| Stage II (moderate) | 120 | – | – | 120 | 138 | – |
| Stage III (severe) | 98 | – | – | 98 | 121 | – |
| Stage IV (very severe) | 75 | – | – | 75 | 24 | – |
COPD: chronic obstructive pulmonary disease; FEV1: forced expiratory volume in 1 second; FVC: forced vital capacity.
a A p value of <0.05 was considered to be statistically significant.
Association of genotype distribution of three SNPs with COPD risk in the patients and controls.
| SNP ID | Genotype | COPD Patients | Healthy Controls | Logistics | Regression | ||
|---|---|---|---|---|---|---|---|
| OR (95% CI) | |||||||
| rs3743073 | GG | 109 (26.8) | 106 (24.4) | 1 (reference) | |||
| GT | 190 (46.7) | 207 (47.6) | 0.502 | 1.14 (0.69-1.88) | 0.615 | ||
| TT | 108 (26.5) | 122 (28.0) | 0.430 | 1.24 (0.81-1.91) | 0.322 | ||
| rs667282 | TT | 118 (29.0) | 108 (24.8) | 1 (reference) | |||
| CT | 162 (39.8) | 197 (45.3) | 0.095 | 0.77 (0.51-1.15) | 0.196 | ||
| CC | 127 (31.2) | 130 (29.9) | 0.540 | 0.70 (0.48-1.02) | 0.066 | ||
| rs4950 | AA | 183 (45.0) | 208 (47.8) | 1 (reference) | |||
| AG | 164 (40.3) | 181 (41.6) | 0.842 | 1.28 (0.78-2.07) | 0.310 | ||
| GG | 60 (14.7) | 46 (10.6) | 0.073 | 0.90 (0.65-1.26) | 0.549 |
SNPs ID: single nucleotide polymorphisms identification; COPD: chronic obstructive pulmonary disease; OR: odds ratio; 95% CI: 95% confidence interval.
a A p value of <0.05 was considered to be statistically significant.
Association of genotype distribution of three SNPs with smoking cessation in still smoking and non smoking subjects.
| SNP ID | Genotype | Still Smoking | Non Smoking | Logistics | Regression | ||
|---|---|---|---|---|---|---|---|
| OR (95% CI)b | |||||||
| rs3743073 | GG | 109 (26.8) | 92 (22.1) | 1 (reference) | |||
| GT | 190 (46.7) | 221 (53.1) | 0.063 | 1.01 (0.66-1.53) | 0.975 | ||
| TT | 108 (26.5) | 103 (24.8) | 0.093 | 0.73 (0.51-1.05) | 0.731 | ||
| rs667282 | TT | 118 (29.0) | 92 (22.1) | 1 (reference) | |||
| CT | 162 (39.8) | 205 (49.3) | 0.005 | 0.54 (0.37-0.77) | 0.001 | ||
| CC | 127 (31.2) | 119 (28.6) | 0.330 | 0.75 (0.50-1.10) | 0.142 | ||
| CT+CC | 289 (71.0) | 324 (77.9) | 0.024 | 0.61 (0.44-0.86) | 0.004 | ||
| TT+CC | 245 (60.2) | 211 (50.7) | – | – | – | ||
| CT | 162 (39.8) | 205 (49.3) | 0.006 | 0.61 (0.45-0.83) | 0.001 | ||
| rs4950 | AA | 183 (45.0) | 143 (34.3) | 1 (reference) | |||
| AG | 164 (40.3) | 217 (52.2) | 0.001 | 0.55 (0.40-0.76) | <0.001 | ||
| GG | 60 (14.7) | 56 (13.5) | 0.412 | 0.85 (0.54-1.32) | 0.462 | ||
| AG+GG | 224 (55.0) | 273 (65.7) | 0.002 | 0.62 (0.46-0.83) | 0.001 | ||
| AA+GG | 243 (59.7) | 199 (47.8) | – | – | – | ||
| AG | 164 (40.3) | 217 (52.2) | 0.001 | 0.58 (0.43-0.79) | <0.001 |
SNPs ID: single nucleotide polymorphisms identification; COPD: chronic obstructive pulmonary disease; OR: odds ratio; 95% CI: 95% confidence interval.
a A p value of <0.05 was considered to be statistically significant.
Stratification analysis of rs667282 genotypes by selected variables in still smoking and non smoking subjects.
| Category | Still Smoking | Non Smoking | ||||||
|---|---|---|---|---|---|---|---|---|
| TT | CT | TT | CT | OR (9% CI) | ||||
| Age (years) | <60 | 39 | 53 | 22 | 45 | 0.66 (0.35-1.28) | 0.221 | |
| 60 | 80 | 109 | 78 | 160 | 0.66 (0.45-0.99) | 0.042 | ||
| Cigarettes/Day | <20 | 84 | 104 | 77 | 164 | 0.58 (0.39-0.86) | 0.007 | |
| 20 | 35 | 58 | 23 | 41 | 0.93 (0.48-1.80) | 0.829 | ||
| Initial age smoking | <20 years | 75 | 114 | 66 | 149 | 0.67 (0.45-1.02) | 0.059 | |
| >20 years | 44 | 48 | 34 | 56 | 0.66 (0.37-1.20) | 0.171 | ||
OR: odds ratio; 95% CI: 95% confidence interval.
Stratification analysis of rs4950 genotypes by selected variables in still smoking and non smoking subjects.
| Category | Still Smoking | Non Smoking | ||||||
|---|---|---|---|---|---|---|---|---|
| AA | AG | AA | AG | OR (9% CI) | ||||
| Age (years) | <60 | 52 | 76 | 28 | 40 | 1.02 (0.56-1.86) | 0.940 | |
| >60 | 128 | 106 | 118 | 174 | 1.22 (0.86-1.73) | 0.260 | ||
| Cigarettes/Day | <20 | 116 | 114 | 106 | 161 | 0.65 (0.45-0.92) | 0.016 | |
| >20 | 64 | 68 | 40 | 53 | 0.80 (0.47-1.37) | 0.417 | ||
| Initial age smoking | <20 years | 113 | 116 | 94 | 133 | 0.73 (0.50-1.05) | 0.089 | |
| >20 years | 67 | 66 | 52 | 81 | 0.63 (0.39-1.03) | 0.064 | ||
OR: odds ratio; 95% CI: 95% confidence interval.
Association of rs667282 and rs4950 polymorphisms with the GOLD stage of COPD patients.
| Category | Still Smoking | OR (95% CI) | Non Smoking | OR (95% CI) | ||||
|---|---|---|---|---|---|---|---|---|
| rs667292 | TT | CT | TT | CT | ||||
| GOLD status: I and II | 71 | 93 | reference | 55 | 126 | reference | ||
| GOLD status: III and IV | 48 | 70 | 0.90 (0.57-1.45) | 0.661 | 45 | 79 | 1.31 (0.80-2.12) | 0.281 |
| rs4950 | AA | AG | AA | AG | ||||
| GOLD status: I and II | 102 | 110 | reference | 104 | 136 | reference | ||
| GOLD status: III and IV | 78 | 82 | 1.03 (0.68-1.55) | 0.903 | 42 | 78 | 0.70 (0.45-0.11) | 0.129 |
OR: odds ratio; 95% CI: 95% confidence interval.