| Literature DB >> 31938519 |
Francesca De Luca1, Elena Fanelli1, Monica Oreste2, Gianluca Scarcia1, Alberto Troccoli1, Alessio Vovlas3, Nicola Trisciuzzi4, Eustachio Tarasco1,2.
Abstract
A survey of nematodes associated with the red palm weevil Rhynchophorus ferrugineus was conducted in southern Italy in 2015 and 2016 in order to create a species inventory and obtain data about nematode biodiversity. A total of 70 insect samples (pupae and adults) were collected from infested Phoenix canariensis, Phoenix dactylifera, and Chamaerops humilis palms in three Italian Regions: sampling took place at 11 locations in Apulia, 1 in Basilicata, and 1 in Sardinia regions. Individual insects were dissected to determine nematode presence, and different nematode species were also recovered from red palm weevil cocoons collected at the sites in Apulia. Individual nematodes were molecularly identified by sequencing the ITS, D2-D3 expansion domains of the 28SrRNA gene and the mitochondrial COI and inferring the phylogenetic relationships. The insect-associated nematofauna identified belonged to the families Rhabditidae, Cephalobidae, and Diplogastridae. Just two nematode species, Teratorhabditis synpapillata and Mononchoides macrospiculum, were always found in association with adult insects and cocoons taken from all sampling sites. This paper reports on the biodiversity of the nematodes associated with R. ferrugineus and on current knowledge of the specific habitat of specialized and divergent entomophilic nematodes.Entities:
Keywords: molecular biodiversity; nematode fauna; red palm weevil; reverse taxonomy
Year: 2019 PMID: 31938519 PMCID: PMC6953676 DOI: 10.1002/ece3.5865
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 2.912
Figure 1Chamaerops humilis palm infected by Rhynchophorus ferrugineus (a); symptoms of infected C. humilis trunk (b); cocoons of R. ferrugineus and Paysandisia archon indicated by arrow (c); basal leaf portion of Phoenix dactilifera containing cocoons (d); cocoon with R. ferrugineus (e); adult insect during dissection (f); cocoon material incubated in water for nematode collection (g)
Locality and BLAST results using ITS and D2‐D3 expansion domains of nematodes associated with Rhynchophorus ferrugineus
| Region | Site | GPS coordinates | Host plant | No. sites | No. insects | Nematode associates | GenBank Accession number | Identity % | |||
|---|---|---|---|---|---|---|---|---|---|---|---|
| ITS | D2‐D3 | ITS | D2‐D3 | ||||||||
| Apulia | Bari‐Campus | (BA) | N 41.109089° |
| 1 | 5 |
| LN827623 | LN827616 | 99 | 100 |
| E 16.879650° |
| LN827626 | AB269817 | 100 | 100 | ||||||
| Monopoli | (BA) | N 40.96021° |
| 4 | 13 |
| LN827623 | LN827616 | 99 | 100 | |
| E 017.28381° |
| LN82762 | AB26981 | 100 | 100 | ||||||
| N 40.954044° |
| KJ877276 | 99.72 | ||||||||
| E 017.30872° |
| No corresponding sequences | No corresponding sequences | ||||||||
| N 40.93986° | |||||||||||
| E 017.31256° | |||||||||||
| Conversano | (BA) | N 40.95015° |
| 1 | 6 |
| LN827623 | LN827616 | 99 | 100 | |
| E 017.12207° |
| LN82762 | AB26981 | 100 | 100 | ||||||
| Rhabditidae | No corresponding sequences | No corresponding sequences | |||||||||
| Toritto | (BA) | – |
| 1 | 8 |
| LN827623 | LN827616 | 99 | 100 | |
|
| LN82762 | AB26981 | 100 | 100 | |||||||
| Ostuni | (BR) | N 40.78768° |
| 1 | 4 |
| LN827623 | LN827616 | 99 | 100 | |
| E 017.58508° |
| LN82762 | AB26981 | 100 | 100 | ||||||
| San Vito | (BR) | N 40.72231° |
| 1 | 13 |
| LN827623 | LN827616 | 99 | 100 | |
| E 017.74842° |
| LN82762 | AB26981 | 100 | 100 | ||||||
|
| KY828308 | KX669640 | 98–99 | 100 | |||||||
|
| KJ938579 | MK294532 | 99.6 | 100 | |||||||
| Specchiolla | (BR) | N 40.735509° |
| 1 | 3 |
| LN827623 | LN827616 | 99 | 100 | |
| E 17.738917° | |||||||||||
| Palagiano | (TA) | N 40.51116° |
| 1 | 6 |
| LN827623 | LN827616 | 99 | 100 | |
| E 016.99177° |
| LN82762 | AB26981 | 100 | 100 | ||||||
|
| LC374584 | 100 | |||||||||
| Basilicata | Matera | (MT) | – |
| 1 | 4 |
| LN82762 | AB26981 | 100 | 100 |
| Sardinia | Olmedo | (SS) | – |
| 1 | 9 |
| LN82762 | AB26981 | 100 | 100 |
|
| LT908055 | 99.6 | |||||||||
Figure 2Phylogenetic tree of ITS containing region describing the evolutionary relationships among different geographical populations of Oscheius tipulae using maximum likelihood (ML) method. Branch lengths are proportional to the distances as derived from the distance matrix obtained using the GTR method with the invariant site plus gamma options. Numbers at nodes indicate bootstrap values
Figure 3Phylogenetic tree of ITS containing region describing the evolutionary relationships of Acrobeloides cf. nanus (a) and Acrostichus sp. (b) associated with Rhynchophorus ferrugineus using maximum likelihood (ML) method. Branch lengths are proportional to the distances as derived from the distance matrix obtained using the GTR method with the invariant site plus gamma options. Numbers at nodes indicate bootstrap values