Literature DB >> 31937231

From one pattern into another: analysis of Turing patterns in heterogeneous domains via WKBJ.

Andrew L Krause1, Václav Klika2, Thomas E Woolley3, Eamonn A Gaffney1.   

Abstract

Pattern formation from homogeneity is well studied, but less is known concerning symmetry-breaking instabilities in heterogeneous media. It is non-trivial to separate observed spatial patterning due to inherent spatial heterogeneity from emergent patterning due to nonlinear instability. We employ WKBJ asymptotics to investigate Turing instabilities for a spatially heterogeneous reaction-diffusion system, and derive conditions for instability which are local versions of the classical Turing conditions. We find that the structure of unstable modes differs substantially from the typical trigonometric functions seen in the spatially homogeneous setting. Modes of different growth rates are localized to different spatial regions. This localization helps explain common amplitude modulations observed in simulations of Turing systems in heterogeneous settings. We numerically demonstrate this theory, giving an illustrative example of the emergent instabilities and the striking complexity arising from spatially heterogeneous reaction-diffusion systems. Our results give insight both into systems driven by exogenous heterogeneity, as well as successive pattern forming processes, noting that most scenarios in biology do not involve symmetry breaking from homogeneity, but instead consist of sequential evolutions of heterogeneous states. The instability mechanism reported here precisely captures such evolution, and extends Turing's original thesis to a far wider and more realistic class of systems.

Keywords:  Turing instabilities; WKBJ; heterogeneity; pattern formation

Mesh:

Year:  2020        PMID: 31937231      PMCID: PMC7014807          DOI: 10.1098/rsif.2019.0621

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  33 in total

1.  Dynamics of Turing patterns under spatiotemporal forcing.

Authors:  S Rüdiger; D G Míguez; A P Muñuzuri; F Sagués; J Casademunt
Journal:  Phys Rev Lett       Date:  2003-03-26       Impact factor: 9.161

Review 2.  Reaction-diffusion model as a framework for understanding biological pattern formation.

Authors:  Shigeru Kondo; Takashi Miura
Journal:  Science       Date:  2010-09-24       Impact factor: 47.728

3.  Stripe-hexagon competition in forced pattern-forming systems with broken up-down symmetry.

Authors:  R Peter; M Hilt; F Ziebert; J Bammert; C Erlenkämper; N Lorscheid; C Weitenberg; A Winter; M Hammele; W Zimmermann
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2005-04-21

4.  Landscape ecology: spatial heterogeneity in ecological systems.

Authors:  S T Pickett; M L Cadenasso
Journal:  Science       Date:  1995-07-21       Impact factor: 47.728

5.  A theory of biological pattern formation.

Authors:  A Gierer; H Meinhardt
Journal:  Kybernetik       Date:  1972-12

6.  Pattern formation in reaction-diffusion systems with piecewise kinetic modulation: An example study of heterogeneous kinetics.

Authors:  Michal Kozák; Eamonn A Gaffney; Václav Klika
Journal:  Phys Rev E       Date:  2019-10       Impact factor: 2.529

7.  Modelling biological invasions: Individual to population scales at interfaces.

Authors:  J Belmonte-Beitia; T E Woolley; J G Scott; P K Maini; E A Gaffney
Journal:  J Theor Biol       Date:  2013-06-13       Impact factor: 2.691

8.  Self-organizing hair peg-like structures from dissociated skin progenitor cells: New insights for human hair follicle organoid engineering and Turing patterning in an asymmetric morphogenetic field.

Authors:  Erin L Weber; Thomas E Woolley; Chao-Yuan Yeh; Kuang-Ling Ou; Philip K Maini; Cheng-Ming Chuong
Journal:  Exp Dermatol       Date:  2019-04       Impact factor: 3.960

9.  Influence of Curvature, Growth, and Anisotropy on the Evolution of Turing Patterns on Growing Manifolds.

Authors:  Andrew L Krause; Meredith A Ellis; Robert A Van Gorder
Journal:  Bull Math Biol       Date:  2018-12-03       Impact factor: 1.758

10.  A method to recapitulate early embryonic spatial patterning in human embryonic stem cells.

Authors:  Aryeh Warmflash; Benoit Sorre; Fred Etoc; Eric D Siggia; Ali H Brivanlou
Journal:  Nat Methods       Date:  2014-06-29       Impact factor: 28.547

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  6 in total

1.  Isolating Patterns in Open Reaction-Diffusion Systems.

Authors:  Andrew L Krause; Václav Klika; Philip K Maini; Denis Headon; Eamonn A Gaffney
Journal:  Bull Math Biol       Date:  2021-06-04       Impact factor: 1.758

Review 2.  Modern perspectives on near-equilibrium analysis of Turing systems.

Authors:  Andrew L Krause; Eamonn A Gaffney; Philip K Maini; Václav Klika
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2021-11-08       Impact factor: 4.226

3.  Boundary Conditions Cause Different Generic Bifurcation Structures in Turing Systems.

Authors:  Thomas E Woolley
Journal:  Bull Math Biol       Date:  2022-08-11       Impact factor: 3.871

4.  Turing Patterning in Stratified Domains.

Authors:  Andrew L Krause; Václav Klika; Jacob Halatek; Paul K Grant; Thomas E Woolley; Neil Dalchau; Eamonn A Gaffney
Journal:  Bull Math Biol       Date:  2020-10-15       Impact factor: 1.758

5.  Landscape-induced spatial oscillations in population dynamics.

Authors:  Vivian Dornelas; Eduardo H Colombo; Cristóbal López; Emilio Hernández-García; Celia Anteneodo
Journal:  Sci Rep       Date:  2021-02-10       Impact factor: 4.379

6.  The role of mechanics in the growth and homeostasis of the intestinal crypt.

Authors:  A A Almet; H M Byrne; P K Maini; D E Moulton
Journal:  Biomech Model Mechanobiol       Date:  2020-11-21
  6 in total

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