Literature DB >> 31916773

Performance and Cost Assessment of Machine Learning Interatomic Potentials.

Yunxing Zuo1, Chi Chen1, Xiangguo Li1, Zhi Deng1, Yiming Chen1, Jörg Behler2, Gábor Csányi3, Alexander V Shapeev4, Aidan P Thompson5, Mitchell A Wood5, Shyue Ping Ong1.   

Abstract

Machine learning of the quantitative relationship between local environment descriptors and the potential energy surface of a system of atoms has emerged as a new frontier in the development of interatomic potentials (IAPs). Here, we present a comprehensive evaluation of machine learning IAPs (ML-IAPs) based on four local environment descriptors-atom-centered symmetry functions (ACSF), smooth overlap of atomic positions (SOAP), the spectral neighbor analysis potential (SNAP) bispectrum components, and moment tensors-using a diverse data set generated using high-throughput density functional theory (DFT) calculations. The data set comprising bcc (Li, Mo) and fcc (Cu, Ni) metals and diamond group IV semiconductors (Si, Ge) is chosen to span a range of crystal structures and bonding. All descriptors studied show excellent performance in predicting energies and forces far surpassing that of classical IAPs, as well as predicting properties such as elastic constants and phonon dispersion curves. We observe a general trade-off between accuracy and the degrees of freedom of each model and, consequently, computational cost. We will discuss these trade-offs in the context of model selection for molecular dynamics and other applications.

Entities:  

Year:  2020        PMID: 31916773     DOI: 10.1021/acs.jpca.9b08723

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  14 in total

Review 1.  Machine Learning Force Fields and Coarse-Grained Variables in Molecular Dynamics: Application to Materials and Biological Systems.

Authors:  Paraskevi Gkeka; Gabriel Stoltz; Amir Barati Farimani; Zineb Belkacemi; Michele Ceriotti; John D Chodera; Aaron R Dinner; Andrew L Ferguson; Jean-Bernard Maillet; Hervé Minoux; Christine Peter; Fabio Pietrucci; Ana Silveira; Alexandre Tkatchenko; Zofia Trstanova; Rafal Wiewiora; Tony Lelièvre
Journal:  J Chem Theory Comput       Date:  2020-07-16       Impact factor: 6.006

2.  Dielectric response with short-ranged electrostatics.

Authors:  Stephen J Cox
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-03       Impact factor: 11.205

3.  Gaussian Process Regression for Materials and Molecules.

Authors:  Volker L Deringer; Albert P Bartók; Noam Bernstein; David M Wilkins; Michele Ceriotti; Gábor Csányi
Journal:  Chem Rev       Date:  2021-08-16       Impact factor: 60.622

4.  Body-Ordered Approximations of Atomic Properties.

Authors:  Jack Thomas; Huajie Chen; Christoph Ortner
Journal:  Arch Ration Mech Anal       Date:  2022-08-06       Impact factor: 2.528

5.  Role of the M point phonons for the dynamical stability of B2 compounds.

Authors:  Shota Ono; Daigo Kobayashi
Journal:  Sci Rep       Date:  2022-05-04       Impact factor: 4.996

6.  Combining Machine Learning and Computational Chemistry for Predictive Insights Into Chemical Systems.

Authors:  John A Keith; Valentin Vassilev-Galindo; Bingqing Cheng; Stefan Chmiela; Michael Gastegger; Klaus-Robert Müller; Alexandre Tkatchenko
Journal:  Chem Rev       Date:  2021-07-07       Impact factor: 60.622

7.  Accelerated mapping of electronic density of states patterns of metallic nanoparticles via machine-learning.

Authors:  Kihoon Bang; Byung Chul Yeo; Donghun Kim; Sang Soo Han; Hyuck Mo Lee
Journal:  Sci Rep       Date:  2021-06-02       Impact factor: 4.379

8.  Kernel-Based Machine Learning for Efficient Simulations of Molecular Liquids.

Authors:  Christoph Scherer; René Scheid; Denis Andrienko; Tristan Bereau
Journal:  J Chem Theory Comput       Date:  2020-04-24       Impact factor: 6.006

9.  A stable cathode-solid electrolyte composite for high-voltage, long-cycle-life solid-state sodium-ion batteries.

Authors:  Erik A Wu; Swastika Banerjee; Hanmei Tang; Peter M Richardson; Jean-Marie Doux; Ji Qi; Zhuoying Zhu; Antonin Grenier; Yixuan Li; Enyue Zhao; Grayson Deysher; Elias Sebti; Han Nguyen; Ryan Stephens; Guy Verbist; Karena W Chapman; Raphaële J Clément; Abhik Banerjee; Ying Shirley Meng; Shyue Ping Ong
Journal:  Nat Commun       Date:  2021-02-23       Impact factor: 14.919

10.  Machine Learning for Shape Memory Graphene Nanoribbons and Applications in Biomedical Engineering.

Authors:  Carlos León; Roderick Melnik
Journal:  Bioengineering (Basel)       Date:  2022-02-23
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