| Literature DB >> 31914992 |
Gyorgy J Simon1,2, Kevin A Peterson3, M Regina Castro4, Michael S Steinbach5, Vipin Kumar5, Pedro J Caraballo6.
Abstract
BACKGROUND: The ubiquity of electronic health records (EHR) offers an opportunity to observe trajectories of laboratory results and vital signs over long periods of time. This study assessed the value of risk factor trajectories available in the electronic health record to predict incident type 2 diabetes. STUDY DESIGN AND METHODS: Analysis was based on a large 13-year retrospective cohort of 71,545 adult, non-diabetic patients with baseline in 2005 and median follow-up time of 8 years. The trajectories of fasting plasma glucose, lipids, BMI and blood pressure were computed over three time frames (2000-2001, 2002-2003, 2004) before baseline. A novel method, Cumulative Exposure (CE), was developed and evaluated using Cox proportional hazards regression to assess risk of incident type 2 diabetes. We used the Framingham Diabetes Risk Scoring (FDRS) Model as control.Entities:
Keywords: Diabetes; Diabetes trajectories; Prediabetes; Risk assessment
Year: 2020 PMID: 31914992 PMCID: PMC6950847 DOI: 10.1186/s12911-019-1009-3
Source DB: PubMed Journal: BMC Med Inform Decis Mak ISSN: 1472-6947 Impact factor: 2.796
Description of the cohort. For lab results and vitals, the median and interquartile range and for medication usage and progression to diabetes the number and percentage of patients are reported
| Variable | Median | Interquartile Range |
|---|---|---|
| Age [years] | 51 | 41, 62 |
| Male [%] | 38.4 | |
| LDL [mg/dL] | 111 | 91, 32 |
| TG [mg/dL] | 114 | 81, 161 |
| HDL [mg/dL] | 52 | 43, 64 |
| SBP [Hg mm] | 122 | 110, 132 |
| DBP [Hg mm] | 73 | 66, 80 |
| FPG [mg/dL] | 92 | 87, 99 |
| Follow-up [years] | 9.5 | 8.0, 9.8 |
| Number of patients | Percent | |
| Antihypertensive medication | 6571 | 21.7 |
| Antilipemic medication | 5395 | 17.8 |
| Progressed to DM | 2972 | 9.8 |
Fig. 1Performance comparison of the four regression models and the Framingham score. FDRS: Framingham Diabtes Risk Score, CE: Cumulative Exposure, EV: Extreme Value, EV + CE: Extreme Plus Cumulative Exposure. Performance is measured through survival concordance using bootstrap estimation with 1000 replications. The performance difference between any two models is statistically significant at .05 level
Coefficients of the four models organized by timeframe. 2000–2001 refers to the cumulative exposure between 01/01/2000 and 12/31/2001; 2001–2002 refers to the cumulative exposure between 01/01/2002 and 12/31/2003; 2004 is the cumulative exposure in 2004; ‘Baseline’ refers to the latest observations before baseline; and ‘5-year extreme’ refers to the most extreme (minimum for HDL and maximum for others) observations between 01/01/2000 and 12/31/2004
| fasting | bmi | sbp | dbp | ldl | hdl | trigl | |
|---|---|---|---|---|---|---|---|
| Baseline | |||||||
| Most recent | 0.064 | 0.009 | 0.011 | −0.021 | 0.002 | ||
| Cumulative Exposure | |||||||
| 2000–2001 | 0.034 | 0.010 | 0.001 | ||||
| 2002–2003 | 0.035 | −0.002 | |||||
| 2004 | 0.011 | ||||||
| Most recent | 0.041 | 0.005 | 0.009 | −0.017 | 0.001 | ||
| Extreme Values | |||||||
| Most recent | 0.018 | 0.011 | 0.009 | −0.018 | 0.001 | ||
| 5-year extreme | 0.072 | −0.004 | 0.004 | −0.001 | 0.001 | ||
| Extreme Plus Cumulative | |||||||
| 2000–2001 | 0.008 | 0.016 | −0.009 | ||||
| 2002–2003 | 0.022 | 0.018 | |||||
| 2004 | |||||||
| Most recent | 0.015 | 0.013 | 0.008 | −0.015 | 0.001 | ||
| 5-year extreme | 0.062 | −0.009 | 0.009 | −0.001 | 0.001 | ||
Comparison of the 5 subpopulations. The label of the subpopulation is derived from the diabetes status of the patients in the three time periods: 2000–2001, 2002–2003, and 2004. For example, ‘pnn’ patients were pre-diabetic in 2000–2001, normal in 2002–2003 and normal in 2004; ‘npn’ patients were normal in 2000–2001, prediabetic in 2002–2003 and normal in 2004. The other subpopulation labels can be interpreted analogously
| All | pnn | npn | nnp | npp | nnn | |
|---|---|---|---|---|---|---|
| N | 30,284 | 2181 | 1193 | 1065 | 889 | 14,387 |
| Age [median; years] | 51 | 55 | 56 | 54 | 55 | 49 |
| Male [%] | 38 | 42 | 42 | 37 | 48 | 32 |
| LDL [median; mg/dL] | 111 | 111 | 109 | 113 | 113 | 111 |
| TG [median; mg/dL] | 114 | 120 | 118 | 129 | 135 | 106 |
| HDL [median; mg/dL] | 53 | 54 | 52 | 53 | 50 | 56 |
| SBP [median; Hg mm] | 122 | 124 | 124 | 124 | 125 | 120 |
| DBP [median; Hg mm] | 73 | 74 | 74 | 74 | 76 | 72 |
| FPG [median; mg/dL] | 92 | 93 | 93 | 104 | 105 | 89 |
| BMI [median; kg/m2] | 27 | 28 | 28 | 29 | 29 | 26 |
| Antihypertensive medication [%] | 21.7 | 27.0 | 32.4 | 29.9 | 29.8 | 17.6 |
| Antihyperlipidemi medication [%] | 17.8 | 22.2 | 27.8 | 22.5 | 23.3 | 15.2 |
| Fullow-up [median; years] | 9.51 | 9.55 | 9.55 | 9.56 | 9.43 | 9.59 |
| Diabetes outcome [%] | 9.8 | 8.9 | 12.2 | 14.1 | 19.9 | 4.4 |
Estimating diabetes risk in subpopulations that developed pre-diabetes at different time points. Some groups returned to normoglycemia thereafter. The table shows the number of patients (N), mean predicted diabetes risk as the expected number of incidents in 10 years (Pred) and the estimation error (Error) by the Baseline, Cumulative Exposure, and the Extreme Value models
| Subpopulation | N | Baseline | Cumulative | Extreme | |||
|---|---|---|---|---|---|---|---|
| Pred | Error | Pred | Error | Pred | Error | ||
| PreDM in 2000–2001, normal from 2003 onwards | 2181 | .135 | .006 | .145 | .001 | .181 | −.018 |
| PreDM in 2002–2003, normal before and after | 1193 | .157 | .026 | .175 | .019 | .262 | −.034 |
| Normal before 2004, PreDM in 2004 | 1065 | .332 | −.057 | .235 | .001 | .282 | −.234 |
| Normal before 2002–2003, PreDM since then | 889 | .411 | −.029 | .384 | −.008 | .402 | −.019 |
| Normal throughout 2000–2004 | 14,387 | .092 | −.016 | .080 | −.007 | .069 | −.001 |