Literature DB >> 31906737

Sphingomonas: from diversity and genomics to functional role in environmental remediation and plant growth.

Sajjad Asaf1, Muhammad Numan1, Abdul Latif Khan1, Ahmed Al-Harrasi1.   

Abstract

The species belonging to the Sphingomonas genus possess multifaceted functions ranging from remediation of environmental contaminations to producing highly beneficial phytohormones, such as sphingan and gellan gum. Recent studies have shown an intriguing role of Sphingomonas species in the degradation of organometallic compounds. However, the actual biotechnological potential of this genus requires further assessment. Some of the species from the genus have also been noted to improve plant-growth during stress conditions such as drought, salinity, and heavy metals in agricultural soil. This role has been attributed to their potential to produce plant growth hormones e.g. gibberellins and indole acetic acid. However, the current literature is scattered, and some of the important areas, such as taxonomy, phylogenetics, genome mapping, and cellular transport systems, are still being overlooked in terms of elucidation of the mechanisms behind stress-tolerance and bioremediation. In this review, we elucidated the prospective role and function of this genus for improved utilization during environmental biotechnology.

Entities:  

Keywords:  Sphingomonas; ecology; environmental remediation; genomics; metabolite transport; metabolomics production; phylogenetic relationship; plant growth; stress tolerance; taxonomy

Mesh:

Substances:

Year:  2020        PMID: 31906737     DOI: 10.1080/07388551.2019.1709793

Source DB:  PubMed          Journal:  Crit Rev Biotechnol        ISSN: 0738-8551            Impact factor:   8.429


  34 in total

1.  Characteristics and diversity of endophytic bacteria in Panax notoginseng under high temperature analysed using full-length 16S rRNA sequencing.

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Journal:  Arch Microbiol       Date:  2022-06-28       Impact factor: 2.552

2.  Sugars and Jasmonic Acid Concentration in Root Exudates Affect Maize Rhizosphere Bacterial Communities.

Authors:  Lucas Dantas Lopes; Peng Wang; Stephanie L Futrell; Daniel P Schachtman
Journal:  Appl Environ Microbiol       Date:  2022-09-08       Impact factor: 5.005

3.  Sphingomonas Relies on Chemotaxis to Degrade Polycyclic Aromatic Hydrocarbons and Maintain Dominance in Coking Sites.

Authors:  Meng Zhou; Zishu Liu; Jiaqi Wang; Yuxiang Zhao; Baolan Hu
Journal:  Microorganisms       Date:  2022-05-27

4.  A Multi-Omics Study of Familial Lung Cancer: Microbiome and Host Gene Expression Patterns.

Authors:  Ying Chen; Yunchao Huang; Xiaojie Ding; Zhenlin Yang; Liang He; Mingjie Ning; Zhenghong Yang; Daqian He; Lijuan Yang; Zhangyi Liu; Yan Chen; Guangjian Li
Journal:  Front Immunol       Date:  2022-04-11       Impact factor: 8.786

5.  Niche specificity and functional diversity of the bacterial communities associated with Ginkgo biloba and Panax quinquefolius.

Authors:  Hanan R Shehata; Subramanyam Ragupathy; Thomas A Henry; Steven G Newmaster
Journal:  Sci Rep       Date:  2021-05-24       Impact factor: 4.379

6.  Description of Microbial Communities of Phosphate Mine Wastes in Morocco, a Semi-Arid Climate, Using High-Throughput Sequencing and Functional Prediction.

Authors:  Najoua Mghazli; Laila Sbabou; Rachid Hakkou; Ahmed Ouhammou; Mariam El Adnani; Odile Bruneel
Journal:  Front Microbiol       Date:  2021-07-08       Impact factor: 5.640

7.  Endophytic Microbiome Responses to Sulfur Availability in Beta vulgaris (L.).

Authors:  Giovanni Bertoldo; Maria Cristina Della Lucia; Andrea Squartini; Giuseppe Concheri; Chiara Broccanello; Alessandro Romano; Samathmika Ravi; Massimo Cagnin; Andrea Baglieri; Piergiorgio Stevanato
Journal:  Int J Mol Sci       Date:  2021-07-02       Impact factor: 5.923

8.  Root-Associated Bacterial Community Shifts in Hydroponic Lettuce Cultured with Urine-Derived Fertilizer.

Authors:  Thijs Van Gerrewey; Christophe El-Nakhel; Stefania De Pascale; Jolien De Paepe; Peter Clauwaert; Frederiek-Maarten Kerckhof; Nico Boon; Danny Geelen
Journal:  Microorganisms       Date:  2021-06-18

9.  Gullies and Moraines Are Islands of Biodiversity in an Arid, Mountain Landscape, Asgard Range, Antarctica.

Authors:  Adam J Solon; Claire Mastrangelo; Lara Vimercati; Pacifica Sommers; John L Darcy; Eli M S Gendron; Dorota L Porazinska; S K Schmidt
Journal:  Front Microbiol       Date:  2021-06-10       Impact factor: 5.640

10.  The Macleaya cordata Symbiont: Revealing the Effects of Plant Niches and Alkaloids on the Bacterial Community.

Authors:  Fangying Lei; Xueduan Liu; Haonan Huang; Shaodong Fu; Kai Zou; Shuangfei Zhang; Li Zhou; Jianguo Zeng; Hongwei Liu; Luhua Jiang; Bo Miao; Yili Liang
Journal:  Front Microbiol       Date:  2021-06-09       Impact factor: 5.640

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