Literature DB >> 31901757

COL1A1 and MZB1 as the hub genes influenced the proliferation, invasion, migration and apoptosis of rectum adenocarcinoma cells by weighted correlation network analysis.

Wenyu Wu1, Zhu Yang2, Fengxi Long3, Li Luo4, Qian Deng3, Jinlin Wu3, Silu Ouyang3, Dongxin Tang5.   

Abstract

OBJECTIVES: The influences of COL1A1 and MZB1 on the proliferation, migration, invasion and apoptosis abilities of rectum adenocarcinoma was aimed to explore in this study.
METHODS: Gene expression levels in rectum adenocarcinoma and adjacent tissues were analyzed by differential analysis. Weighted gene correlation network analysis (WGCNA) was employed to investigate rectal adenocarcinoma (READ) hub genes. MCODE was performed to screen the modules of protein-protein interaction network in Cytoscape software. Database for Annotation, Visualization and Integrated Discovery (DAVID) online tool is considered to be the most effective tool in gene ontology (GO) enrichment and Kyoto Gene and Genomics Encyclopedia (KEGG) pathway analysis. Survival analysis was performed using READ patient information from TCGA-READ project database. Quantitative Real-time Polymerase Chain Reaction (qRT-PCR) and western blot were employedto examinemRNA and protein expressions of COL1A1 and MZB1 in tumor tissues and cell lines. After transfecting various interference sequences by liposome-mediated transfection, the influence of COL1A1 and MZB1 on the proliferation, apoptosis, migration and invasion of rectal cancer cells were observed by plate clone formation assay, flow cytometry, wound healing assay and transwell assay respectively. Moreover, xenograft tumor growth assay in vivo validated the results.
RESULTS: Higher expression levels of COL1A1 and lower expression levels of MZB1 were discovered in tumor tissues of patients with colorectal adenocarcinoma. Overexpression of MZB1 and silencing COL1A1 significantly inhibited proliferation, migration and invasion, while cell apoptosis was promoted. Overexpression of MZB1 and silencing COL1A1 inhibited the orthotopic growth of tumor in vivo.
CONCLUSION: COL1A1 promoted proliferation, migration and invasion but inhibited apoptosis of rectal adenocarcinoma cells while MZB1 was totally on the contrary.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  COL1A1; Hub gene; MZB1; Rectum adenocarcinoma; WGCNA

Year:  2019        PMID: 31901757     DOI: 10.1016/j.bioorg.2019.103457

Source DB:  PubMed          Journal:  Bioorg Chem        ISSN: 0045-2068            Impact factor:   5.275


  11 in total

1.  Prognostic targets recognition of rectal adenocarcinoma based on transcriptomics.

Authors:  Xingcheng Yi; Yulai Zhou; Hanyu Zheng; Luoying Wang; Tong Xu; Cong Fu; Xiaoyun Su
Journal:  Medicine (Baltimore)       Date:  2021-08-13       Impact factor: 1.817

Review 2.  Bioreactors for Vocal Fold Tissue Engineering.

Authors:  Ana M Gracioso Martins; Andreea Biehl; Daphne Sze; Donald O Freytes
Journal:  Tissue Eng Part B Rev       Date:  2021-03-17       Impact factor: 6.389

3.  Weighted correlation gene network analysis reveals a new stemness index-related survival model for prognostic prediction in hepatocellular carcinoma.

Authors:  Qiujing Zhang; Jia Wang; Menghan Liu; Qingqing Zhu; Qiang Li; Chao Xie; Congcong Han; Yali Wang; Min Gao; Jie Liu
Journal:  Aging (Albany NY)       Date:  2020-07-09       Impact factor: 5.682

Review 4.  Role of Polymeric Immunoglobulin Receptor in IgA and IgM Transcytosis.

Authors:  Hao Wei; Ji-Yang Wang
Journal:  Int J Mol Sci       Date:  2021-02-25       Impact factor: 5.923

5.  Bioinformatic Identification of Potential Hub Genes in Muscle-Invasive Bladder Urothelial Carcinoma.

Authors:  Changgang Guo; Ting Shao; Dadong Wei; Chunsheng Li; Fengjun Liu; Minghui Li; Zhiming Gao; Guochang Bao
Journal:  Cell Transplant       Date:  2020 Jan-Dec       Impact factor: 4.064

6.  COL1A1 is a prognostic biomarker and correlated with immune infiltrates in lung cancer.

Authors:  Qishun Geng; Zhibo Shen; Lifeng Li; Jie Zhao
Journal:  PeerJ       Date:  2021-03-30       Impact factor: 2.984

7.  RNA-Associated Co-expression Network Identifies Novel Biomarkers for Digestive System Cancer.

Authors:  Zheng Chen; Zijie Shen; Zilong Zhang; Da Zhao; Lei Xu; Lijun Zhang
Journal:  Front Genet       Date:  2021-03-26       Impact factor: 4.599

8.  ETV4 plays a role on the primary events during the adenoma-adenocarcinoma progression in colorectal cancer.

Authors:  Aline Simoneti Fonseca; Anelisa Ramão; Matheus Carvalho Bürger; Jorge Estefano Santana de Souza; Dalila Lucíola Zanette; Greice Andreotti de Molfetta; Luiza Ferreira de Araújo; Rafaela de Barros E Lima Bueno; Graziela Moura Aguiar; Jessica Rodrigues Plaça; Cleidson de Pádua Alves; Anemari Ramos Dinarte Dos Santos; Daniel Onofre Vidal; Gyl Eanes Barros Silva; Rodrigo Alexandre Panepucci; Fernanda Maris Peria; Omar Feres; José Joaquim Ribeiro da Rocha; Marco Antonio Zago; Wilson Araújo Silva
Journal:  BMC Cancer       Date:  2021-03-01       Impact factor: 4.430

9.  Identification of a 5-Gene-Based Scoring System by WGCNA and LASSO to Predict Prognosis for Rectal Cancer Patients.

Authors:  He Huang; Shilei Xu; Aidong Chen; Fen Li; Jiezhong Wu; Xusheng Tu; Kunpeng Hu
Journal:  Anal Cell Pathol (Amst)       Date:  2021-03-23       Impact factor: 2.916

10.  Identification of a Five-Gene Prognostic Signature Related to B Cells Infiltration in Pancreatic Adenocarcinoma.

Authors:  Shaomei Tang; Xiaoliang Huang; Haixing Jiang; Shanyu Qin
Journal:  Int J Gen Med       Date:  2021-08-30
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.