| Literature DB >> 31896793 |
Lei Sun1, Baoqing Zhu2, Xuanyin Zhang1, Huiling Wang1, Ailing Yan1, Guojun Zhang1, Xiaoyue Wang1, Haiying Xu3,4.
Abstract
Aroma is an important parameter for table grapes and wines; terpenes are typical compounds in Muscat-type grape cultivars and can be easily perceived by humans because of their low olfactory threshold. Volatile terpenes contribute directly to the aroma character, while glycoside-bound terpenes are potential aromatic compounds and can be changed to their volatile forms via hydrolysis. With gas chromatography-mass spectrometry and a solid-phase microextraction method, an automatic data analysis platform was constructed; terpene compounds were identified and quantified from three table grape cultivars at three stages during berry development, and the raw data were deposited in MetaboLights. Terpene metabolite accumulation profiles are presented in this article for integrative analysis with the transcriptome data and phenotypic data to elucidate the important candidate genes and mechanism for terpene biosynthesis. Our method has applications in the identification and quantification of terpene compounds with very low or trace concentrations.Entities:
Mesh:
Substances:
Year: 2020 PMID: 31896793 PMCID: PMC6940363 DOI: 10.1038/s41597-019-0321-1
Source DB: PubMed Journal: Sci Data ISSN: 2052-4463 Impact factor: 6.444
Fig. 1flowchart of the experimental design.
Identification information of the compounds.
| Compounds | Retention time | Retention Index | Molecular formula | Standard for quantification | Fragmentation | Ion for identification | Calibration Curves |
|---|---|---|---|---|---|---|---|
| β-Myrcene | 13.977 | 1173 | C10H16 | β-Myrcene | 41/69/93 | 41/93 | y = 3350.8x − 1.0946 |
| Phellandrene | 13.756 | 1165 | C10H16 | Limonene | 77/93/91/136 | 77/93 | y = 306.8x + 0.9404 |
| β-trans-Ocimene | 16.662 | 1251 | C10H16 | β-Myrcene | 79/93/121 | 79/93 | y = 3350.8x − 1.0946 |
| γ-Terpinene | 17.184 | 1253 | C10H16 | Terpinolene | 91/93/121/136 | 93/121 | y = 300.19x + 1.3797 |
| β-cis-Ocimene | 17.386 | 1242 | C10H16 | β-Myrcene | 79/93/121 | 79/93 | y = 3350.8x − 1.0946 |
| Terpinolene | 18.747 | 1291 | C10H16 | Terpinolene | 91/93/121/136 | 93/121 | y = 300.19x + 1.3797 |
| Cis Rose oxide | 21.629 | 1338 | C10H18O | Rose oxide | 69/139/154 | 139 | y = 37.312x + 3.259 |
| trans-Rose oxide | 22.289 | 1375 | C10H18O | Rose oxide | 69/139/154 | 139 | y = 37.312x + 3.259 |
| (E,Z)-Allo-Ocimene | 22.518 | 1381 | C10H16 | β-Myrcene | 105/121/136 | 105/121 | y = 3350.8x − 1.0946 |
| Allo-Ocimene | 23.471 | 1397 | C10H16 | β-Myrcene | 105/121/136 | 121/136 | y = 3350.8x − 1.0946 |
| nerol oxide | 26.414 | 1480 | C10H16O | Nerol | 41/67/68/83 | 68/83 | y = 930.79x + 8.9527 |
| Citronellal | 26.776 | 1765 | C10H18O | Citronellal | 41/69/95/121 | 41/69 | y = 70680x + 43.97 |
| Neral | 34.916 | 1755 | C10H16O | citral | 41/69/109 | 41/69 | y = 52.961x + 2.6933 |
| geranial | 37.006 | 1680 | C10H16O | citral | 41/69/84 | 41/69 | y = 52.961x + 2.6933 |
| cis-isogeraniol | 39.415 | 1818 | C10H18O | Geraniol | 41/81/109/121 | 41/81/109 | y = 1476.8x + 0.392 |
| Geranic acid | 56.744 | 2340 | C10H16O2 | Geranic acid | 41/69/100 | 41/69/100 | y = 6818.4x + 7.8939 |
| Linalool | 29.627 | 1581 | C10H18O | Linalool | 55/71/93/121 | 93 | y = 396.8x + 3.2904 |
| α-Terpineol | 35.647 | 1710 | C10H18O | α-Terpineol | 59/93/121/136 | 136 | y = 958.5x + 5.9227 |
| Nerol | 39.384 | 1797 | C10H18O | Nerol | 41/69/93 | 69 | y = 930.79x + 8.9527 |
| Geraniol | 41.043 | 1857 | C10H18O | Geraniol | 41/69 | 69 | y = 1476.8x + 0.392 |
| Citronellol | 37.966 | 1766 | C10H20O | β-Citronellol | 41/69/82/95 | 69 | y = 1323.9x + 0.3414 |
| Limonene | 15.223 | 1205 | C10H18O2 | Limonene | 68/93/121/136 | 68/93 | y = 306.8x + 0.9404 |
| cis-furan linalool oxide | 25.175 | 1448 | C10H18O2 | Linalool | 41/43/59/68 | 59/94 | y = 396.8x + 3.2904 |
| trans-furan linalool oxide | 26.567 | 1477 | C10H18O2 | Linalool | 41/43/59/68 | 59/94 | y = 396.8x + 3.2904 |
| Linalool oxide pyranoside | 37.143 | 1691 | C10H18O2 | Linalool | 41/43/59/68 | 68 | y = 396.8x + 3.2904 |
| trans-isogeraniol | 39.751 | 1829 | C10H18O | Geraniol | 41/81/109/121 | 121 | y = 1476.8x + 0.392 |
The concentration of free-form terpenes.
| terpenes | X | Y | Z | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EL35 | SE | EL36 | SE | EL38 | SE | EL35 | SE | EL36 | SE | EL38 | SE | EL35 | SE | EL36 | SE | EL38 | SE | |
| β-Myrcene | 5.55c | 0.52 | 181.88a | 16.93 | 66.79b | 8.82 | 3.18c | 0.12 | 6.32c | 3.57 | 19.67c | 6.92 | 7.73c | 1.56 | 20.08c | 14.50 | 70.36b | 12.11 |
| phellandrene | 1.4c | 0.20 | 25.85a | 2.12 | 10.73b | 1.33 | 0.59c | 0.03 | 1.19c | 0.61 | 3.53c | 1.02 | 1.26c | 0.22 | 3.31c | 1.83 | 10.94b | 2.07 |
| β-trans-Ocimene | nd | N/A | 52.92a | 3.02 | 22.37b | 4.30 | 3.41ef | 0.06 | 3.37ef | 1.06 | 7.51d | 1.85 | 3.91def | 0.33 | 6.93de | 3.29 | 16.73c | 2.43 |
| γ-Terpinene | nd | N/A | 3.9a | 0.62 | 2.93b | 0.38 | nd | N/A | 1.24e | 0.14 | 1.69cd | 0.23 | 1.35de | 0.02 | 1.42de | 0.17 | 1.97c | 0.17 |
| β-cis-Ocimene | 3.55ef | 0.17 | 105.61a | 6.19 | 46.92b | 8.81 | nd | N/A | 4.56ef | 2.31 | 13.54d | 4.24 | 5.54def | 0.68 | 11.94de | 6.85 | 32.81c | 5.10 |
| Terpinolene | 1.29c | 0.02 | 16.65a | 0.94 | 15.34a | 7.17 | 1.13c | 0.01 | 1.8c | 0.96 | 5.97b | 1.34 | 2.11c | 0.09 | 4.28b | 0.83 | 6.16b | 0.68 |
| Cis-Rose oxide | 1.17d | 0.03 | 2.45b | 0.10 | 1.2d | 0.03 | nd | N/A | 1.01d | 0.02 | 1.06d | 0.03 | 1.15d | 0.04 | 1.98c | 0.39 | 5.48a | 0.72 |
| trans-Rose oxide | nd | 0.00 | 1.31b | 0.03 | nd | 0.00 | nd | N/A | nd | N/A | nd | N/A | nd | 0.01 | 1.16c | 0.11 | 2.17a | 0.23 |
| (E,Z)-Allo-Ocimene | nd | N/A | 28.99a | 1.97 | 17.03b | 2.05 | 2.55ef | 0.02 | 3.1de | 0.73 | 5.9d | 1.34 | 3.48de | 0.22 | 5.34de | 2.17 | 12.04c | 1.56 |
| Allo-Ocimene | nd | N/A | 11.51a | 0.60 | 7.58b | 0.69 | 2.54e | 0.02 | 2.74de | 0.24 | 3.7d | 0.44 | 2.83de | 0.08 | 3.46de | 0.71 | 5.94c | 0.57 |
| nerol oxide | 23.81cde | 4.04 | 202.76a | 13.86 | 60.58b | 7.13 | 8.1e | 0.66 | 12.83e | 1.21 | 16.56de | 1.05 | 39.42bce | 3.81 | 44.86bc | 11.02 | 208.69a | 25.86 |
| Neral | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | 0.07 | 2.71b | 0.55 | 7.83a | 1.05 |
| geranial | 2.27ab | 0.18 | 9.38b | 0.53 | 2.57ab | 1.59 | nd | N/A | 1.83ab | 0.11 | 2.03ab | 0.57 | 3.07ab | 1.20 | 4.22ab | 6.43 | 49.18a | 6.32 |
| cis-isogeraniol | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | 43.33a | 7.20 |
| Geranic acid | 42.73cd | 3.44 | 67.02bcd | 5.26 | 75.23bc | 25.84 | 13.7d | 3.01 | 40.9cd | 1.81 | 32.04cd | 8.94 | 102.6ab | 30.68 | 40.85cd | 36.64 | 144.59a | 54.50 |
| Linalool | 8.43e | 1.63 | 1473.24a | 85.83 | 407.39b | 50.65 | 3.87e | 0.19 | 26.27e | 22.51 | 118.76d | 35.07 | 23.33e | 1.93 | 118.88d | 43.87 | 213.87c | 15.84 |
| 4-Terpineol | 1.32e | 0.27 | 9.52a | 0.36 | 7.11b | 0.81 | 1.07e | 0.09 | 1.05e | 0.65 | 4.96c | 0.74 | 1.7de | 0.10 | 2.04de | 0.32 | 2.92d | 0.24 |
| α-Terpineol | 10.7e | 0.62 | 181.57a | 11.42 | 118.04b | 16.39 | 9.05e | 0.21 | 16.85e | 13.66 | 99.24c | 13.21 | 23.63e | 1.16 | 53.25d | 5.86 | 59.13d | 6.90 |
| Nerol | 17.76b | 1.78 | 149.16b | 9.59 | 33.62b | 15.91 | 2.7b | 1.00 | 16.12b | 2.82 | 26.58b | 5.88 | 23.52b | 10.26 | 43.46b | 76.11 | 1572.38a | 283.38 |
| Geraniol | 49.91d | 5.06 | 335.44b | 24.83 | 90.86cd | 67.12 | 25.84d | 5.20 | 45.67d | 6.52 | 65.83d | 19.63 | 137.19cd | 60.46 | 187.85c | 369.05 | 1035.58a | 387.88 |
| Citronellol | 3.86c | 0.54 | 13.63b | 0.90 | 2.02c | 1.27 | 1.8c | 0.05 | 2.03c | 0.06 | 1.94c | 0.18 | 3.6c | 0.87 | 3.94c | 5.18 | 40.86a | 6.09 |
| Limonene | 2.08e | 0.22 | 82.01a | 4.38 | 21.67bc | 6.38 | 1.13e | 0.06 | 3.69e | 3.08 | 16.07cd | 4.46 | 4.83e | 0.40 | 12.54d | 4.33 | 25.64b | 3.89 |
| α-muurolene | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | 3.09a | 0.09 |
| cis-furan linalool oxide | 3.35bc | 0.34 | 12.86a | 0.60 | 3.71b | 0.15 | nd | 0.00 | 0.5d | 0.54 | 3.44bc | 0.17 | 2.8c | 0.13 | 3.43bc | 0.33 | 4.05b | 0.15 |
| trans-furan linalool oxide | 1.73c | 0.31 | 10.02a | 0.46 | 3b | 0.24 | nd | 0.00 | 0.25d | 0.25 | 1.74c | 0.24 | 1.85c | 0.15 | 1.44c | 0.25 | 2.7b | 0.18 |
| Linalool oxide pyranoside | 0.45d | 0.20 | 8.12a | 0.44 | 3.68b | 0.28 | nd | N/A | 0.42d | 0.44 | 2.79c | 0.28 | 0.27d | 0.06 | 2.51c | 0.23 | 3.65b | 0.13 |
| trans-isogeraniol | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | 39.26a | 6.24 |
X, Y, and Z represent the cultivars Xiangfei, Italia and Zaomeiguixiang, respectively. Different letters represent significance levels of P < 0.05, and nd stands for nondetected. N/A stands for not available and SE stands for standard error.
The concentration of the bound-form terpene.
| terpenes | X | Y | Z | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EL35 | SE | EL36 | SE | EL38 | SE | EL35 | SE | EL36 | SE | EL38 | SE | EL35 | SE | EL36 | SE | EL38 | SE | |
| β-Myrcene | nd | N/A | 226.64cd | 2.85 | 463.98c | 12.03 | nd | N/A | nd | 1.62 | 168.21cd | 6.48 | nd | N/A | 2465.33a | 79.12 | 1262.42b | 26.56 |
| phellandrene | nd | N/A | 5.79c | 0.01 | 9.51bc | 0.33 | nd | N/A | nd | N/A | nd | N/A | nd | N/A | 20.10a | 0.50 | 12.42b | 0.15 |
| β-trans-Ocimene | nd | N/A | 41.87d | 1.44 | 115.39c | 3.38 | nd | N/A | 14.67d | 0.46 | 29.71d | 1.34 | 36.72d | 0.95 | 601.16a | 19.26 | 279.24b | 6.18 |
| γ-Terpinene | nd | N/A | nd | N/A | 8.79c | 0.07 | nd | N/A | nd | N/A | nd | N/A | 7.82c | 0.02 | 26.43a | 0.69 | 15.75b | 0.20 |
| β-cis-Ocimene | 36.92d | 2.32 | 90.13d | 2.91 | 227.08c | 6.60 | 2.12d | 0.26 | 44.46d | 0.79 | 62.31d | 2.62 | 75.26d | 2.77 | 1176.79a | 37.71 | 567.18b | 11.97 |
| Terpinolene | 7.51d | 0.03 | 8.71c | 0.05 | 11.89c | 0.14 | nd | N/A | 7.48c | 0.02 | 7.98c | 0.04 | 8.34c | 0.03 | 41.82a | 1.14 | 20.90b | 0.29 |
| cis Rose oxide | 16.64d | 0.01 | 16.68cd | 0.01 | 16.95c | 0.02 | nd | N/A | 16.44d | 0.01 | 16.55d | 0.01 | 16.68cd | 0.01 | 22.74a | 0.18 | 19.24b | 0.04 |
| trans-Rose oxide | 16.41cd | 0.00 | 16.43cd | 0.00 | 16.52c | 0.01 | nd | N/A | 16.35d | 0.00 | 16.39d | 0.00 | 16.42cd | 0.00 | 18.50a | 0.06 | 17.32b | 0.01 |
| (E,Z)-Allo-Ocimene | nd | N/A | 12.13d | 0.13 | 39.53c | 1.34 | nd | N/A | 4.04d | 0.18 | 8.00d | 0.05 | 12.19d | 0.21 | 202.00a | 6.49 | 94.72b | 1.98 |
| Allo-Ocimene | nd | N/A | 4.47cd | 0.08 | 18.92c | 0.73 | nd | N/A | nd | N/A | 2.36d | 0.02 | 4.54cd | 0.13 | 125.31a | 4.10 | 53.04b | 1.17 |
| nerol oxide | 65.11d | 0.51 | 66.88d | 0.59 | 96.93c | 1.50 | 48.89d | 0.37 | 53.89d | 0.90 | 56.89d | 0.23 | 100.79c | 1.34 | 469.91a | 14.54 | 218.50b | 2.58 |
| Citronellal | 292.93d | 0.92 | 372.55d | 3.09 | 471.13bc | 6.56 | 236.55d | 1.31 | 306.75d | 3.15 | 347.35d | 4.49 | 365.23d | 5.29 | 1230.16a | 31.75 | 676.88b | 7.85 |
| Neral | 14.64de | 0.05 | 14.67de | 0.03 | 18.75c | 0.16 | 13.70e | 0.02 | 14.18de | 0.09 | 14.39de | 0.02 | 16.33d | 0.11 | 43.87a | 0.73 | 24.21b | 0.16 |
| geranial | 14.27e | 0.03 | 14.71de | 0.03 | 17.55c | 0.12 | 13.78e | 0.01 | 14.41e | 0.08 | 14.73de | 0.04 | 15.71d | 0.04 | 30.87a | 0.47 | 19.83b | 0.09 |
| cis-isogeraniol | nd | N/A | 8.38cd | 0.13 | 11.89bc | 0.25 | nd | N/A | nd | N/A | 6.22cd | 0.05 | 6.56cd | 0.07 | 40.45a | 1.15 | 18.46b | 0.22 |
| Geranic acid | 579.99d | 14.63 | 367.87d | 21.20 | 2921.57b | 109.64 | 185.55d | 15.29 | 308.82d | 28.46 | 450.35d | 8.47 | 1775.95c | 15.06 | 4971.88a | 134.20 | 967.30cd | 15.75 |
| Linalool | 22.12c | 0.10 | 175.18a | 5.19 | 179.63a | 4.87 | 17.57c | 0.06 | 27.94c | 0.81 | 71.82b | 1.96 | 28.53c | 0.28 | 204.30a | 6.24 | 102.95b | 1.34 |
| α-Terpineol | 31.96c | 0.03 | 34.06c | 0.10 | 39.58b | 0.31 | 30.85c | 0.05 | 32.64c | 0.20 | 33.07c | 0.10 | 33.84c | 0.15 | 66.02a | 1.15 | 42.13b | 0.23 |
| Nerol | 228.83c | 3.79 | 506.78c | 13.28 | 824.18c | 21.56 | 86.67c | 0.65 | 205.77c | 2.90 | 308.27c | 11.35 | 298.33c | 7.02 | 4215.95a | 129.51 | 2267.67b | 37.62 |
| Geraniol | 146.64d | 1.56 | 223.76d | 4.15 | 442.51c | 10.72 | 96.09d | 0.61 | 181.65d | 0.72 | 230.27d | 6.39 | 257.38d | 2.88 | 1130.06a | 31.58 | 642.51b | 8.88 |
| Citronellol | 12.48e | 0.95 | 36.26d | 0.98 | 64.26c | 1.10 | 17.44de | 0.48 | 14.32e | 0.33 | 22.21de | 0.16 | 32.69de | 0.34 | 190.26a | 4.70 | 116.94b | 1.51 |
| Limonene | 7.20d | 0.22 | 12.71cd | 0.23 | 22.03c | 0.41 | 8.35cd | 0.11 | 7.62cd | 0.08 | 9.45cd | 0.04 | 12.55cd | 0.08 | 112.07a | 3.38 | 59.24b | 1.08 |
| α-muurolene | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A |
| cis-furan linalool oxide | nd | N/A | 18.90b | 0.03 | 18.24c | 0.03 | nd | N/A | nd | N/A | nd | N/A | nd | N/A | 21.03a | 0.02 | 18.38c | N/A |
| trans-furan linalool oxide | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A |
| Linalool oxide pyranoside | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | nd | N/A | 19.77a | 0.01 | nd | N/A |
| trans-isogeraniol | nd | N/A | 3.74cd | 0.01 | 4.97bc | 0.02 | nd | N/A | nd | N/A | nd | N/A | nd | N/A | 17.38a | 0.52 | 7.97b | 0.10 |
X, Y, Z represent the cultivars Xiangfei, Italia and Zaomeiguixiang. Different letters represent significant levels of P < 0.05, and nd stands for nondetected. N/A stands for not available, SE stands for standard error.
Fig. 2Heatmap of terpene concentration in table grapes during three developmental stages.
Fig. 3PCA analysis of terpene concentration at three stages.
| Measurement(s) | Terpene Compound |
| Technology Type(s) | gas chromatography-mass spectrometry • solid-phase micro-extraction |
| Factor Type(s) | cultivar • developmental stage • biological replicate |
| Sample Characteristic - Organism | Vitis vinifera |