Literature DB >> 31894468

Changes in the GN/GCof the M segment show positive selection and recombination of one aggressive isolate and two mild isolates of tomato spotted wilt virus.

B E González-Pacheco1, L Delaye1, D Ochoa2, R Rojas2, L Silva-Rosales3.   

Abstract

We isolated and compared three tomato spotted wilt virus (TSWV) isolates from lettuce (TSWV-Let), pepper (TSWV-Pep), and tomato (TSWV-Tom) from central Mexico to determine their ability to infect a set of eighteen differential plant species from seven families. TWSV-Let was an aggressive isolate with the ability to infect up to 52% of the differential plants, including maize, under greenhouse conditions. The nucleotide (nt) sequences of the three isolates are more than 90% similar in the M and S RNA segments. In the M segment of the TSWV-Let isolate, we detected nt changes in their intergenic region (IGR) and, in the Gc gene, a region containing a recombination site, as well as a synapomorphy associated with one of three sites under positive selection with a change in one aa residue (a cysteine-to-valine mutation). We speculate on the association of these features in the Gc gene with host selection, adaptation, aggressiveness, and ability to infect maize plants.

Entities:  

Keywords:  Gc; Synapomorphy and recombination; TSWV maize; TSWV-Let; TWSV pepper and TSWV tomato

Mesh:

Substances:

Year:  2020        PMID: 31894468     DOI: 10.1007/s11262-019-01723-6

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  40 in total

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Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

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Authors:  Tancred Frickey; Andrei Lupas
Journal:  Bioinformatics       Date:  2004-07-29       Impact factor: 6.937

3.  Non-viral heterogeneous sequences at the 5' ends of tomato spotted wilt virus mRNAs.

Authors:  R Kormelink; F van Poelwijk; D Peters; R Goldbach
Journal:  J Gen Virol       Date:  1992-08       Impact factor: 3.891

4.  Tomato spotted wilt virus glycoproteins exhibit trafficking and localization signals that are functional in mammalian cells.

Authors:  M Kikkert; A Verschoor; R Kormelink; P Rottier; R Goldbach
Journal:  J Virol       Date:  2001-01       Impact factor: 5.103

5.  Molecular Diagnosis of Tomato Spotted Wilt Tospovirus Infection of Peanut and Other Field and Greenhouse Crops.

Authors:  R K Jain; S S Pappu; H R Pappu; A K Culbreath; J W Todd
Journal:  Plant Dis       Date:  1998-08       Impact factor: 4.438

6.  The molecular population genetics of the Tomato spotted wilt virus (TSWV) genome.

Authors:  M Tsompana; J Abad; M Purugganan; J W Moyer
Journal:  Mol Ecol       Date:  2005-01       Impact factor: 6.185

7.  NSs encoded by groundnut bud necrosis virus is a bifunctional enzyme.

Authors:  Bhushan Lokesh; Panigrahi R Rashmi; Bhat S Amruta; Dharmaiah Srisathiyanarayanan; Mathur R N Murthy; Handanahal S Savithri
Journal:  PLoS One       Date:  2010-03-18       Impact factor: 3.240

8.  Expression and characterization of a soluble form of tomato spotted wilt virus glycoprotein GN.

Authors:  Anna E Whitfield; Diane E Ullman; Thomas L German
Journal:  J Virol       Date:  2004-12       Impact factor: 5.103

9.  Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees.

Authors:  Ivica Letunic; Peer Bork
Journal:  Nucleic Acids Res       Date:  2016-04-19       Impact factor: 16.971

Review 10.  Domestication and breeding of tomatoes: what have we gained and what can we gain in the future?

Authors:  Yuling Bai; Pim Lindhout
Journal:  Ann Bot       Date:  2007-08-23       Impact factor: 4.357

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  1 in total

1.  Variation Profile of the Orthotospovirus Genome.

Authors:  Deepti Nigam; Hernan Garcia-Ruiz
Journal:  Pathogens       Date:  2020-06-29
  1 in total

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