Literature DB >> 31894394

Illumina MiSeq sequencing and network analysis the distribution and co-occurrence of bacterioplankton in Danjiangkou Reservoir, China.

Zhao-Jin Chen1, Ge Xu2, Chuan-Yu Ding1, Bao-Hai Zheng2, Yan Chen2, Hui Han1, Yu-Ying Li3, Jian-Wei Shi4, Lan-Qun Hu4.   

Abstract

Network analysis has contributed to studies of the interactions of microorganisms and the identification of key populations. However, such analysis has rarely been conducted in the study of reservoir bacterioplankton communities. This study investigated the bacterioplankton community composition in the surface water of the Danjiangkou Reservoir using the Illumina MiSeq sequencing platform. We observed that the bacterioplankton community primarily consisted of 27 phyla and 336 genera, including Actinobacteria, Proteobacteria, and Bacteroidetes, demonstrating the richness of the community composition. Redundancy analysis of the bacterioplankton communities and environmental variables showed that the total nitrogen (TN), pH, chemical oxygen demand (COD), and permanganate index (CODMn) were important factors affecting the bacterioplankton distribution. Network analysis was performed using the relative abundances of bacterioplankton based on the phylogenetic molecular ecological network (pMEN) method. The connectivity of node i within modules (Zi), the connectivity of node i among modules (Pi), and the number of key bacteria were high at the Taizishan and Heijizui sites, which were associated with higher TN contents than at the other sites. Among the physicochemical properties of water, TN, ammonia nitrogen (NH4-N), pH, COD, and dissolved oxygen (DO) might have great influences on the functional units of the bacterial communities in bacterioplankton molecular networks. This study improves the understanding of the structure and function of bacterioplankton communities in the Danjiangkou Reservoir.

Entities:  

Keywords:  Bacterioplankton community structure; Danjiangkou reservoir; MiSeq sequencing; Middle route of the South-to-North water diversion project (MR-SNWDP); Phylogenetic molecular ecological network (pMEN)

Mesh:

Year:  2020        PMID: 31894394     DOI: 10.1007/s00203-019-01798-7

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  4 in total

1.  Dynamics of microbial community structure and enzyme activities during the solid-state fermentation of Forgood Daqu: a starter of Chinese strong flavour Baijiu.

Authors:  Yu Zeng; Yu Wang; Qian Chen; Xiaojun Xia; Qiang Liu; Xiaoming Chen; Dan Wang; Bo Zhu
Journal:  Arch Microbiol       Date:  2022-08-27       Impact factor: 2.667

2.  The Seasonal Patterns, Ecological Function and Assembly Processes of Bacterioplankton Communities in the Danjiangkou Reservoir, China.

Authors:  Zhao-Jin Chen; Yong-Qi Liu; Yu-Ying Li; Li-An Lin; Bao-Hai Zheng; Ming-Fei Ji; B Larry Li; Xue-Mei Han
Journal:  Front Microbiol       Date:  2022-06-15       Impact factor: 6.064

3.  Bama Pig Manure Organic Fertilizer Regulates the Watermelon Rhizosphere Bacterial Community to Inhibit the Occurrence of Fusarium Wilt Under Continuous Cropping Conditions.

Authors:  Hao Zhang; Huiying Yang; Xin Zhang; Jie Sun; Lianzheng Dong; Hui Han; Zhaojin Chen
Journal:  Curr Microbiol       Date:  2022-10-17       Impact factor: 2.343

4.  Rhizosphere Bacterial Community Structure and Predicted Functional Analysis in the Water-Level Fluctuation Zone of the Danjiangkou Reservoir in China During the Dry Period.

Authors:  Zhao-Jin Chen; Yang Shao; Ying-Jun Li; Li-An Lin; Yan Chen; Wei Tian; Bai-Lian Li; Yu-Ying Li
Journal:  Int J Environ Res Public Health       Date:  2020-02-16       Impact factor: 3.390

  4 in total

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