Literature DB >> 31894146

Field-resolved infrared spectroscopy of biological systems.

Ioachim Pupeza1,2, Marinus Huber3,4, Michael Trubetskov4, Wolfgang Schweinberger3,5, Syed A Hussain3,4, Christina Hofer3,4, Kilian Fritsch3, Markus Poetzlberger4, Lenard Vamos4, Ernst Fill3, Tatiana Amotchkina3, Kosmas V Kepesidis3, Alexander Apolonski3, Nicholas Karpowicz4, Vladimir Pervak3,4, Oleg Pronin3,4, Frank Fleischmann4,6, Abdallah Azzeer5, Mihaela Žigman3,4,6, Ferenc Krausz7,8,9.   

Abstract

The proper functioning of living systems and physiological phenotypes depends on molecular composition. Yet simultaneous quantitative detection of a wide variety of molecules remains a challenge1-8. Here we show how broadband optical coherence opens up opportunities for fingerprinting complex molecular ensembles in their natural environment. Vibrationally excited molecules emit a coherent electric field following few-cycle infrared laser excitation9-12, and this field is specific to the sample's molecular composition. Employing electro-optic sampling10,12-15, we directly measure this global molecular fingerprint down to field strengths 107 times weaker than that of the excitation. This enables transillumination of intact living systems with thicknesses of the order of 0.1 millimetres, permitting broadband infrared spectroscopic probing of human cells and plant leaves. In a proof-of-concept analysis of human blood serum, temporal isolation of the infrared electric-field fingerprint from its excitation along with its sampling with attosecond timing precision results in detection sensitivity of submicrograms per millilitre of blood serum and a detectable dynamic range of molecular concentration exceeding 105. This technique promises improved molecular sensitivity and molecular coverage for probing complex, real-world biological and medical settings.

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Year:  2020        PMID: 31894146     DOI: 10.1038/s41586-019-1850-7

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  36 in total

1.  Fuzzy definition of molecular fragments in chemical structures

Authors: 
Journal:  J Chem Inf Comput Sci       Date:  2000-03

2.  Time-domain mid-infrared frequency-comb spectrometer.

Authors:  Fritz Keilmann; Christoph Gohle; Ronald Holzwarth
Journal:  Opt Lett       Date:  2004-07-01       Impact factor: 3.776

3.  Time-domain spectroscopy of molecular free-induction decay in the infrared.

Authors:  Ian Coddington; William C Swann; Nathan R Newbury
Journal:  Opt Lett       Date:  2010-05-01       Impact factor: 3.776

4.  Sensitivity of coherent dual-comb spectroscopy.

Authors:  Nathan R Newbury; Ian Coddington; William Swann
Journal:  Opt Express       Date:  2010-04-12       Impact factor: 3.894

Review 5.  Developing and understanding biofluid vibrational spectroscopy: a critical review.

Authors:  Matthew J Baker; Shawn R Hussain; Lila Lovergne; Valérie Untereiner; Caryn Hughes; Roman A Lukaszewski; Gérard Thiéfin; Ganesh D Sockalingum
Journal:  Chem Soc Rev       Date:  2015-11-27       Impact factor: 54.564

Review 6.  With or without you - Proteomics with or without major plasma/serum proteins.

Authors:  Elisabetta Gianazza; Ingrid Miller; Luca Palazzolo; Chiara Parravicini; Ivano Eberini
Journal:  J Proteomics       Date:  2016-04-10       Impact factor: 4.044

7.  Personal omics profiling reveals dynamic molecular and medical phenotypes.

Authors:  Rui Chen; George I Mias; Jennifer Li-Pook-Than; Lihua Jiang; Hugo Y K Lam; Rong Chen; Elana Miriami; Konrad J Karczewski; Manoj Hariharan; Frederick E Dewey; Yong Cheng; Michael J Clark; Hogune Im; Lukas Habegger; Suganthi Balasubramanian; Maeve O'Huallachain; Joel T Dudley; Sara Hillenmeyer; Rajini Haraksingh; Donald Sharon; Ghia Euskirchen; Phil Lacroute; Keith Bettinger; Alan P Boyle; Maya Kasowski; Fabian Grubert; Scott Seki; Marco Garcia; Michelle Whirl-Carrillo; Mercedes Gallardo; Maria A Blasco; Peter L Greenberg; Phyllis Snyder; Teri E Klein; Russ B Altman; Atul J Butte; Euan A Ashley; Mark Gerstein; Kari C Nadeau; Hua Tang; Michael Snyder
Journal:  Cell       Date:  2012-03-16       Impact factor: 41.582

Review 8.  Multi-omics approaches to disease.

Authors:  Yehudit Hasin; Marcus Seldin; Aldons Lusis
Journal:  Genome Biol       Date:  2017-05-05       Impact factor: 13.583

Review 9.  Revisiting biomarker discovery by plasma proteomics.

Authors:  Philipp E Geyer; Lesca M Holdt; Daniel Teupser; Matthias Mann
Journal:  Mol Syst Biol       Date:  2017-09-26       Impact factor: 11.429

10.  Infrared electric field sampled frequency comb spectroscopy.

Authors:  Abijith S Kowligy; Henry Timmers; Alexander J Lind; Ugaitz Elu; Flavio C Cruz; Peter G Schunemann; Jens Biegert; Scott A Diddams
Journal:  Sci Adv       Date:  2019-06-07       Impact factor: 14.136

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  9 in total

Review 1.  High-power modelocked thin-disk oscillators as potential technology for high-rate material processing.

Authors:  Yicheng Wang; Sergei Tomilov; Clara J Saraceno
Journal:  Adv Opt Technol       Date:  2021-10-13

2.  Analysis of a q-deformed hyperbolic short laser pulse in a multi-level atomic system.

Authors:  N Boutabba; S Grira; H Eleuch
Journal:  Sci Rep       Date:  2022-06-03       Impact factor: 4.996

3.  Photon deceleration in plasma wakes generates single-cycle relativistic tunable infrared pulses.

Authors:  Zan Nie; Chih-Hao Pai; Jie Zhang; Xiaonan Ning; Jianfei Hua; Yunxiao He; Yipeng Wu; Qianqian Su; Shuang Liu; Yue Ma; Zhi Cheng; Wei Lu; Hsu-Hsin Chu; Jyhpyng Wang; Chaojie Zhang; Warren B Mori; Chan Joshi
Journal:  Nat Commun       Date:  2020-06-03       Impact factor: 14.919

4.  Stability of person-specific blood-based infrared molecular fingerprints opens up prospects for health monitoring.

Authors:  Marinus Huber; Kosmas V Kepesidis; Liudmila Voronina; Maša Božić; Michael Trubetskov; Nadia Harbeck; Ferenc Krausz; Mihaela Žigman
Journal:  Nat Commun       Date:  2021-03-08       Impact factor: 14.919

5.  Electro-optic characterization of synthesized infrared-visible light fields.

Authors:  Enrico Ridente; Mikhail Mamaikin; Najd Altwaijry; Dmitry Zimin; Matthias F Kling; Vladimir Pervak; Matthew Weidman; Ferenc Krausz; Nicholas Karpowicz
Journal:  Nat Commun       Date:  2022-03-02       Impact factor: 17.694

6.  Towards Mapping Mouse Metabolic Tissue Atlas by Mid-Infrared Imaging with Heavy Water Labeling.

Authors:  Xinwen Liu; Lixue Shi; Lingyan Shi; Mian Wei; Zhilun Zhao; Wei Min
Journal:  Adv Sci (Weinh)       Date:  2022-03-23       Impact factor: 17.521

7.  Sub-optical-cycle light-matter energy transfer in molecular vibrational spectroscopy.

Authors:  Martin T Peschel; Maximilian Högner; Theresa Buberl; Daniel Keefer; Regina de Vivie-Riedle; Ioachim Pupeza
Journal:  Nat Commun       Date:  2022-10-06       Impact factor: 17.694

8.  Impact of Pathologic Complete Response following Neoadjuvant Chemotherapy ± Trastuzumab in Locally Advanced Breast Cancer.

Authors:  Taher Al-Tweigeri; Mahmoud Elshenawy; Ahmed Badran; Ayman Omar; Kausar Suleman; Osama Al Malik; Ihab Anwar; Noha Jastaniya; Asma Tulbah; Mohammad Al Shabanah; Dahish Ajarim; Adher Al Sayed
Journal:  J Oncol       Date:  2021-02-12       Impact factor: 4.375

9.  Towards reliable diagnostics of prostate cancer via breath.

Authors:  K S Maiti; E Fill; F Strittmatter; Y Volz; R Sroka; A Apolonski
Journal:  Sci Rep       Date:  2021-09-15       Impact factor: 4.379

  9 in total

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