Literature DB >> 31893338

Influence of feature rankers in the construction of molecular activity prediction models.

Gonzalo Cerruela-García1, José Pérez-Parra Toledano2, Aída de Haro-García2, Nicolás García-Pedrajas2.   

Abstract

In the construction of activity prediction models, the use of feature ranking methods is a useful mechanism for extracting information for ranking features in terms of their significance to develop predictive models. This paper studies the influence of feature rankers in the construction of molecular activity prediction models; for this purpose, a comparative study of fourteen rankings methods for feature selection was conducted. The activity prediction models were constructed using four well-known classifiers and a wide collection of datasets. The ranking algorithms were compared considering the performance of these classifiers using different metrics and the consistency of the ranked features.

Keywords:  Feature ranking; Molecular activity prediction; QSAR

Mesh:

Year:  2019        PMID: 31893338     DOI: 10.1007/s10822-019-00273-1

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  36 in total

1.  Feature selection and transduction for prediction of molecular bioactivity for drug design.

Authors:  Jason Weston; Fernando Pérez-Cruz; Olivier Bousquet; Olivier Chapelle; André Elisseeff; Bernhard Schölkopf
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3.  Structure based virtual screening to discover putative drug candidates: necessary considerations and successful case studies.

Authors:  Mohd Danishuddin; Asad U Khan
Journal:  Methods       Date:  2014-10-27       Impact factor: 3.608

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Authors:  Chen Zhang; Feixiong Cheng; Lu Sun; Shulin Zhuang; Weihua Li; Guixia Liu; Philip W Lee; Yun Tang
Journal:  Chemosphere       Date:  2014-12-19       Impact factor: 7.086

Review 5.  Feature selection methods in QSAR studies.

Authors:  Mohammad Goodarzi; Bieke Dejaegher; Yvan Vander Heyden
Journal:  J AOAC Int       Date:  2012 May-Jun       Impact factor: 1.913

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Journal:  Mol Inform       Date:  2011-11-15       Impact factor: 3.353

Review 7.  Descriptors and their selection methods in QSAR analysis: paradigm for drug design.

Authors:  Asad U Khan
Journal:  Drug Discov Today       Date:  2016-06-18       Impact factor: 7.851

8.  Analysis of A Drug Target-based Classification System using Molecular Descriptors.

Authors:  Jing Lu; Pin Zhang; Yi Bi; Xiaomin Luo
Journal:  Comb Chem High Throughput Screen       Date:  2016       Impact factor: 1.339

9.  The hepatotoxic potential of protein kinase inhibitors predicted with Random Forest and Artificial Neural Networks.

Authors:  Verena Schöning; Stephan Krähenbühl; Jürgen Drewe
Journal:  Toxicol Lett       Date:  2018-10-10       Impact factor: 4.372

10.  Multi-objective Optimization of Benzamide Derivatives as Rho Kinase Inhibitors.

Authors:  Giovanna Cardoso Gajo; Daniela Rodrigues Silva; Stephen J Barigye; Elaine Fontes Ferreira da Cunha
Journal:  Mol Inform       Date:  2017-09-06       Impact factor: 3.353

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