Literature DB >> 31889638

Site-directed RNA editing (SDRE): Off-target effects and their countermeasures.

Shaoshuai Mao1, Yajing Liu1, Shisheng Huang1, Xingxu Huang2, Tian Chi3.   

Abstract

Site-directed RNA editing (SDRE) is invaluable to basic research and clinical applications and has emerged as a new frontier in genome editing. The past few years have witnessed a surge of interest in SDRE, with SDRE tools emerging at a breathtaking pace. However, off-target effects of SDRE remain a tough problem, which constitutes a major hurdle to their clinical applications. Here we discuss the diverse strategies for combating off-target editing, drawing lessons from the published studies as well as our ongoing research. Overall, SDRE is still at its infancy, with significant challenges and exciting opportunities ahead.
Copyright © 2019. Published by Elsevier Ltd.

Keywords:  Cas13; Gene editing; Off-target; RNA editing; Specificity

Mesh:

Substances:

Year:  2019        PMID: 31889638     DOI: 10.1016/j.jgg.2019.11.005

Source DB:  PubMed          Journal:  J Genet Genomics        ISSN: 1673-8527            Impact factor:   4.275


  5 in total

1.  Programmable C-to-U RNA editing using the human APOBEC3A deaminase.

Authors:  Xinxin Huang; Junjun Lv; Yongqin Li; Shaoshuai Mao; Zhifang Li; Zhengyu Jing; Yidi Sun; Xiaoming Zhang; Shengxi Shen; Xinxin Wang; Minghui Di; Jianyang Ge; Xingxu Huang; Erwei Zuo; Tian Chi
Journal:  EMBO J       Date:  2020-10-15       Impact factor: 11.598

2.  REPAIRx, a specific yet highly efficient programmable A > I RNA base editor.

Authors:  Yajing Liu; Shaoshuai Mao; Shisheng Huang; Yongqin Li; Yuxin Chen; Minghui Di; Xinxin Huang; Junjun Lv; Xinxin Wang; Jianyang Ge; Shengxi Shen; Xiaoming Zhang; Dahai Liu; Xingxu Huang; Tian Chi
Journal:  EMBO J       Date:  2020-10-15       Impact factor: 11.598

Review 3.  Cas-Based Systems for RNA Editing in Gene Therapy of Monogenic Diseases: In Vitro and in Vivo Application and Translational Potential.

Authors:  Vasiliy V Reshetnikov; Angelina V Chirinskaite; Julia V Sopova; Roman A Ivanov; Elena I Leonova
Journal:  Front Cell Dev Biol       Date:  2022-06-16

4.  A Cas-embedding strategy for minimizing off-target effects of DNA base editors.

Authors:  Yajing Liu; Changyang Zhou; Shisheng Huang; Lu Dang; Yu Wei; Jun He; Yingsi Zhou; Shaoshuai Mao; Wanyu Tao; Yu Zhang; Hui Yang; Xingxu Huang; Tian Chi
Journal:  Nat Commun       Date:  2020-11-27       Impact factor: 14.919

Review 5.  Functional Features and Current Applications of the RNA-Targeting Type VI CRISPR-Cas Systems.

Authors:  Vanja Perčulija; Jinying Lin; Bo Zhang; Songying Ouyang
Journal:  Adv Sci (Weinh)       Date:  2021-05-05       Impact factor: 16.806

  5 in total

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