Literature DB >> 31889437

Stereochemical Elucidation of Natural Products from Residual Chemical Shift Anisotropies in a Liquid Crystalline Phase.

Xiao-Lu Li1, Lu-Ping Chi2,3, Armando Navarro-Vázquez4, Songhwan Hwang1, Peter Schmieder1, Xiao-Ming Li2, Xin Li2, Sui-Qun Yang2, Xinxiang Lei5, Bin-Gui Wang2, Han Sun1.   

Abstract

Determination of the stereochemistry of organic molecules still represents one of the major obstacles in the structure elucidation procedure in drug discovery. Although the application of residual dipolar couplings (RDCs) has revolutionized this field, residual chemical shift anisotropies (RCSAs) which contain valuable structural information for nonprotonated carbons have only been scarcely employed so far. In this study, we present a simple but highly effective solution to extract RCSAs of the analytes in a liquid crystalline phase formed by AAKLVFF oligopeptides. This method does not require any special instruments, devices, or correction during postacquisition data analysis and thus can be easily applied in any chemistry laboratory. To illustrate the potential of this method, the relative configurations of four known natural products (1-4) belonging to different structural classes were confirmed. Moreover, we unambiguously elucidated the stereochemistry of spiroepicoccin A (5), a rare thiodiketopiperazine marine natural product whose configuration could not be assigned based on conventional NMR methods.

Entities:  

Year:  2020        PMID: 31889437     DOI: 10.1021/jacs.9b10961

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  6 in total

Review 1.  Approaches to Configuration Determinations of Flexible Marine Natural Products: Advances and Prospects.

Authors:  Zong-Qing Huo; Feng Zhu; Xing-Wang Zhang; Xiao Zhang; Hong-Bao Liang; Jing-Chun Yao; Zhong Liu; Gui-Min Zhang; Qing-Qiang Yao; Guo-Fei Qin
Journal:  Mar Drugs       Date:  2022-05-19       Impact factor: 6.085

2.  Programmable alignment media from self-assembled oligopeptide amphiphiles for the measurement of independent sets of residual dipolar couplings in organic solvents.

Authors:  Yuexiao Lin; Jiaqian Li; Si-Yong Qin; Han Sun; Yan-Ling Yang; Armando Navarro-Vázquez; Xinxiang Lei
Journal:  Chem Sci       Date:  2022-04-14       Impact factor: 9.969

3.  Antibacterial Alkaloids and Polyketide Derivatives from the Deep Sea-Derived Fungus Penicillium cyclopium SD-413.

Authors:  Yan-He Li; Xiao-Ming Li; Xin Li; Sui-Qun Yang; Xiao-Shan Shi; Hong-Lei Li; Bin-Gui Wang
Journal:  Mar Drugs       Date:  2020-11-06       Impact factor: 5.118

4.  Cytotoxic Thiodiketopiperazine Derivatives from the Deep Sea-Derived Fungus Epicoccum nigrum SD-388.

Authors:  Lu-Ping Chi; Xiao-Ming Li; Li Li; Xin Li; Bin-Gui Wang
Journal:  Mar Drugs       Date:  2020-03-13       Impact factor: 5.118

5.  Unequivocal structure confirmation of a breitfussin analog by anisotropic NMR measurements.

Authors:  Ikenna E Ndukwe; Yu-Hong Lam; Sunil K Pandey; Bengt E Haug; Annette Bayer; Edward C Sherer; Kirill A Blinov; R Thomas Williamson; Johan Isaksson; Mikhail Reibarkh; Yizhou Liu; Gary E Martin
Journal:  Chem Sci       Date:  2020-09-21       Impact factor: 9.825

6.  NMR-Based Configurational Assignments of Natural Products: Gibbs Sampling and Bayesian Inference Using Floating Chirality Distance Geometry Calculations.

Authors:  Stefan Immel; Matthias Köck; Michael Reggelin
Journal:  Mar Drugs       Date:  2021-12-22       Impact factor: 5.118

  6 in total

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