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Literature DB >> 31886560

Towards the unified principles of transcription termination.

Abstract

Discovery of the role of bacterial RNase J1 in termination of transcription suggests common allosteric principles and mechanistic congruency of termination between bacteria and eukaryotes, in which an unrelated RNase Xrn2/Rat1 plays a similar role.

Entities: Chemical

Mesh：

Substances：
Exoribonucleases

Year: 2019 PMID： 31886560 PMCID： PMC6996497 DOI： 10.15252/embj.2019104112

Source DB: PubMed Journal: EMBO J ISSN： 0261-4189 Impact factor: 14.012

13 in total

1. An allosteric path to transcription termination.

Authors: Vitaly Epshtein; Christopher J Cardinale; Andrei E Ruckenstein; Sergei Borukhov; Evgeny Nudler
Journal: Mol Cell Date: 2007-12-28 Impact factor: 17.970

Review 2. Mechanisms of Bacterial Transcription Termination.

Authors: Jeffrey W Roberts
Journal: J Mol Biol Date: 2019-04-09 Impact factor: 5.469

3. Genome-wide Analysis of RNA Polymerase II Termination at Protein-Coding Genes.

Authors: Carlo Baejen; Jessica Andreani; Phillipp Torkler; Sofia Battaglia; Bjoern Schwalb; Michael Lidschreiber; Kerstin C Maier; Andrea Boltendahl; Petra Rus; Stephanie Esslinger; Johannes Söding; Patrick Cramer
Journal: Mol Cell Date: 2017-03-16 Impact factor: 17.970

4. The torpedo effect in Bacillus subtilis: RNase J1 resolves stalled transcription complexes.

Authors: Michaela Šiková; Jana Wiedermannová; Martin Převorovský; Ivan Barvík; Petra Sudzinová; Olga Kofroňová; Oldřich Benada; Hana Šanderová; Ciarán Condon; Libor Krásný
Journal: EMBO J Date: 2019-12-16 Impact factor: 11.598

5. An allosteric mechanism of Rho-dependent transcription termination.

Authors: Vitaly Epshtein; Dipak Dutta; Joseph Wade; Evgeny Nudler
Journal: Nature Date: 2010-01-14 Impact factor: 49.962

Review 6. XRN 5'→3' exoribonucleases: structure, mechanisms and functions.

Authors: Vinay K Nagarajan; Christopher I Jones; Sarah F Newbury; Pamela J Green
Journal: Biochim Biophys Acta Date: 2013-03-19

7. Mfd Dynamically Regulates Transcription via a Release and Catch-Up Mechanism.

Authors: Tung T Le; Yi Yang; Chuang Tan; Margaret M Suhanovsky; Robert M Fulbright; James T Inman; Ming Li; Jaeyoon Lee; Sarah Perelman; Jeffrey W Roberts; Alexandra M Deaconescu; Michelle D Wang
Journal: Cell Date: 2017-12-07 Impact factor: 41.582

8. Xrn2 accelerates termination by RNA polymerase II, which is underpinned by CPSF73 activity.

Authors: Joshua D Eaton; Lee Davidson; David L V Bauer; Toyoaki Natsume; Masato T Kanemaki; Steven West
Journal: Genes Dev Date: 2018-02-08 Impact factor: 11.361

Review 9. RNA toxicity in non-coding repeat expansion disorders.

Authors: Bart Swinnen; Wim Robberecht; Ludo Van Den Bosch
Journal: EMBO J Date: 2019-11-13 Impact factor: 11.598

10. The quantitative and condition-dependent Escherichia coli proteome.

Authors: Alexander Schmidt; Karl Kochanowski; Silke Vedelaar; Erik Ahrné; Benjamin Volkmer; Luciano Callipo; Kèvin Knoops; Manuel Bauer; Ruedi Aebersold; Matthias Heinemann
Journal: Nat Biotechnol Date: 2015-12-07 Impact factor: 54.908

3 in total

Review 1. Rho-dependent transcription termination: a revisionist view.

Authors: Zhitai Hao; Vladimir Svetlov; Evgeny Nudler
Journal: Transcription Date: 2021-10-27

2. Pre-termination Transcription Complex: Structure and Function.

Authors: Zhitai Hao; Vitaly Epshtein; Kelly H Kim; Sergey Proshkin; Vladimir Svetlov; Venu Kamarthapu; Binod Bharati; Alexander Mironov; Thomas Walz; Evgeny Nudler
Journal: Mol Cell Date: 2020-12-08 Impact factor: 17.970

Review 3. β-CASP proteins removing RNA polymerase from DNA: when a torpedo is needed to shoot a sitting duck.

Authors: Jana Wiedermannová; Libor Krásný
Journal: Nucleic Acids Res Date: 2021-10-11 Impact factor: 16.971

3 in total