Literature DB >> 31882638

Proteomic and Transcriptomic Changes in Hibernating Grizzly Bears Reveal Metabolic and Signaling Pathways that Protect against Muscle Atrophy.

D A Mugahid1, T G Sengul1, X You2, Y Wang2, L Steil3, N Bergmann1, M H Radke1, A Ofenbauer2, M Gesell-Salazar3, A Balogh4, S Kempa2, B Tursun2, C T Robbins5, U Völker3,6, W Chen2, L Nelson7, M Gotthardt8,9,10.   

Abstract

Muscle atrophy is a physiological response to disuse and malnutrition, but hibernating bears are largely resistant to this phenomenon. Unlike other mammals, they efficiently reabsorb amino acids from urine, periodically activate muscle contraction, and their adipocytes differentially responds to insulin. The contribution of myocytes to the reduced atrophy remains largely unknown. Here we show how metabolism and atrophy signaling are regulated in skeletal muscle of hibernating grizzly bear. Metabolic modeling of proteomic changes suggests an autonomous increase of non-essential amino acids (NEAA) in muscle and treatment of differentiated myoblasts with NEAA is sufficient to induce hypertrophy. Our comparison of gene expression in hibernation versus muscle atrophy identified several genes differentially regulated during hibernation, including Pdk4 and Serpinf1. Their trophic effects extend to myoblasts from non-hibernating species (including C. elegans), as documented by a knockdown approach. Together, these changes reflect evolutionary favored adaptations that, once translated to the clinics, could help improve atrophy treatment.

Entities:  

Year:  2019        PMID: 31882638      PMCID: PMC6934745          DOI: 10.1038/s41598-019-56007-8

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  63 in total

1.  A novel method for SNP detection using a new duplex-specific nuclease from crab hepatopancreas.

Authors:  Dmitry A Shagin; Denis V Rebrikov; Valery B Kozhemyako; Ilia M Altshuler; Alex S Shcheglov; Pavel A Zhulidov; Ekaterina A Bogdanova; Dmitry B Staroverov; Valery A Rasskazov; Sergey Lukyanov
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

2.  MURF-1 and MURF-2 target a specific subset of myofibrillar proteins redundantly: towards understanding MURF-dependent muscle ubiquitination.

Authors:  Stephanie H Witt; Henk Granzier; Christian C Witt; Siegfried Labeit
Journal:  J Mol Biol       Date:  2005-07-22       Impact factor: 5.469

3.  Role of calpain in skeletal-muscle protein degradation.

Authors:  J Huang; N E Forsberg
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-13       Impact factor: 11.205

4.  Differential expression in RNA-seq: a matter of depth.

Authors:  Sonia Tarazona; Fernando García-Alcalde; Joaquín Dopazo; Alberto Ferrer; Ana Conesa
Journal:  Genome Res       Date:  2011-09-08       Impact factor: 9.043

5.  Coordinate expression of the PDK4 gene: a means of regulating fuel selection in a hibernating mammal.

Authors:  Michael J Buck; Teresa L Squire; Matthew T Andrews
Journal:  Physiol Genomics       Date:  2002-02-11       Impact factor: 3.107

6.  A direct HDAC4-MAP kinase crosstalk activates muscle atrophy program.

Authors:  Moon-Chang Choi; Todd J Cohen; Tomasa Barrientos; Bin Wang; Ming Li; Bryan J Simmons; Jeong Soo Yang; Gregory A Cox; Yingming Zhao; Tso-Pang Yao
Journal:  Mol Cell       Date:  2012-05-31       Impact factor: 17.970

7.  Forty-eight hours of unloading and 24 h of reloading lead to changes in global gene expression patterns related to ubiquitination and oxidative stress in humans.

Authors:  Kimberly A Reich; Yi-Wen Chen; Paul D Thompson; Eric P Hoffman; Priscilla M Clarkson
Journal:  J Appl Physiol (1985)       Date:  2010-08-26

8.  Transcriptional pathways associated with skeletal muscle disuse atrophy in humans.

Authors:  Yi-Wen Chen; Chris M Gregory; Mark T Scarborough; Rongye Shi; Glenn A Walter; Krista Vandenborne
Journal:  Physiol Genomics       Date:  2007-09-05       Impact factor: 3.107

9.  Dietary arginine supplementation increases mTOR signaling activity in skeletal muscle of neonatal pigs.

Authors:  Kang Yao; Yu-Long Yin; Wuyin Chu; Zhiqiang Liu; Dun Deng; Tiejun Li; Ruilin Huang; Jianshe Zhang; Bie Tan; Wence Wang; Guoyao Wu
Journal:  J Nutr       Date:  2008-05       Impact factor: 4.798

10.  Hibernation induces widespread transcriptional remodeling in metabolic tissues of the grizzly bear.

Authors:  Heiko T Jansen; Shawn Trojahn; Michael W Saxton; Joanna L Kelley; Corey R Quackenbush; Brandon D Evans Hutzenbiler; O Lynne Nelson; Omar E Cornejo; Charles T Robbins
Journal:  Commun Biol       Date:  2019-09-13
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  5 in total

Review 1.  Revelations About Aging and Disease from Unconventional Vertebrate Model Organisms.

Authors:  Yang Zhao; Andrei Seluanov; Vera Gorbunova
Journal:  Annu Rev Genet       Date:  2021-08-20       Impact factor: 16.830

2.  Gut transcriptomic changes during hibernation in the greater horseshoe bat (Rhinolophus ferrumequinum).

Authors:  Haijian Sun; Jiaying Wang; Yutong Xing; Yi-Hsuan Pan; Xiuguang Mao
Journal:  Front Zool       Date:  2020-07-17       Impact factor: 3.172

3.  Landscape condition influences energetics, reproduction, and stress biomarkers in grizzly bears.

Authors:  Abbey E Wilson; Dan Wismer; Gordon Stenhouse; Nicholas C Coops; David M Janz
Journal:  Sci Rep       Date:  2021-06-09       Impact factor: 4.379

4.  Nitrogen recycling buffers against ammonia toxicity from skeletal muscle breakdown in hibernating arctic ground squirrels.

Authors:  Sarah A Rice; Gabriella A M Ten Have; Julie A Reisz; Sarah Gehrke; Davide Stefanoni; Carla Frare; Zeinab Barati; Robert H Coker; Angelo D'Alessandro; Nicolaas E P Deutz; Kelly L Drew
Journal:  Nat Metab       Date:  2020-12-07

5.  Integrated genomic and proteomic analyses identify stimulus-dependent molecular changes associated with distinct modes of skeletal muscle atrophy.

Authors:  Liam C Hunt; Flavia A Graca; Vishwajeeth Pagala; Yong-Dong Wang; Yuxin Li; Zuo-Fei Yuan; Yiping Fan; Myriam Labelle; Junmin Peng; Fabio Demontis
Journal:  Cell Rep       Date:  2021-11-09       Impact factor: 9.423

  5 in total

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