| Literature DB >> 31878898 |
Shailima Rampogu1, Ayoung Baek1, Amir Zeb1, Keun Woo Lee2.
Abstract
Following publication of the original article [1], the authors reported errors in Figure 3, Figure 14a, Figure 18, Figure 19b, Additional file 3 and Additional file 7.Entities:
Year: 2019 PMID: 31878898 PMCID: PMC6933660 DOI: 10.1186/s12885-019-6378-6
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Fig. 3Most active compound (IC50 = 0.2) mapped to all the features
Fig. 14a Molecular interaction between the reference- protein (purple). Green dotted lines indicate the hydrogen bonds. The residues are represented in orange stick model
Fig. 18Binding mode assessment of compounds. The co-crystal is represented in gray, reference is denoted in green and the Hit in orange. All the three follow the same pattern
Fig. 19b Intermolecular interactions between the ligand and the protein. Green dotted lines represent the hydrogen bonds. The protein residues are indicated in cyan
Table 1
| Hypo no | Total costa | Cost difference | RMSDb | Correlation | Featuresc | Max fit |
|---|---|---|---|---|---|---|
| Hypo1 | 111.95 | 71.22 | 0.7 | 0.97 | Hy-Ali, 2HyP,RA | 11.4 |
| Hypo 2 | 113.31 | 69.86 | 0.7 | 0.96 | Hy-Ali, 2HyP,RA | 11.5 |
| Hypo 3 | 116.45 | 66.71 | 0.8 | 0.95 | Hy-Ali,HyP,RA,HBA | 11.9 |
| Hypo 4 | 116.47 | 66.69 | 1.0 | 0.94 | HBA, HBD 2HyP | 10.7 |
| Hypo 5 | 117.11 | 66.05 | 0.9 | 0.94 | Hy-Ali,HyP,RA,HBA | 11.5 |
| Hypo 6 | 119.51 | 63.65 | 1.0 | 0.93 | HBA,HBD,2HyP | 11.26 |
| Hypo 7 | 119.52 | 63.65 | 0.9 | 0.95 | HBA,2HyP,RA | 12.65 |
| Hypo 8 | 119.82 | 63.35 | 0.9 | 0.94 | HBA,Hy-Ali,HBD,RA | 12.33 |
| Hypo 9 | 119.94 | 63.23 | 1.2 | 0.91 | HBA,Hy-Ali,2HyP, RA | 11.98 |
| Hypo10 | 120.52 | 62.65 | 1.1 | 0.91 | HBA,HBD, Hy-Ali | 7.8 |
| Page no | Column/paragraph | line | Present word | Change to |
|---|---|---|---|---|
| 1 | Abstract/results | 2 | of | above |
| 2 | 1/2 | 2 | Cyclic | Cyclin |
| 2 | 2/1 | 3 | VEGFR | VEGFR-2 |
| 12 | 2/1 | 3 | prognosis | progression |
| 12 | 2/1 | 10 | form | from |
| 19 | Above conclusions | 4 | Cyc919 | Cys919 |
| 10 | 2/1 | 13 | 20 ps | 20 ns |
| 10 | 2/1 | 15 | 25 ps | 25 ns |
| 13 | 2/1 | 6 | four | five |
| Table 5/ reference | van der Waals interactions | – | asn900leu1044 | Asn900, Ile1044 |
| Fig 10 | – | – | 30 ps | 30 ns |
| Fig 16 | – | – | refrence | reference |