Literature DB >> 31874413

Binding without folding - the biomolecular function of disordered polyelectrolyte complexes.

Benjamin Schuler1, Alessandro Borgia2, Madeleine B Borgia2, Pétur O Heidarsson3, Erik D Holmstrom4, Daniel Nettels5, Andrea Sottini5.   

Abstract

Recent evidence shows that oppositely charged intrinsically disordered proteins (IDPs) can form high-affinity complexes that involve neither the formation of secondary or tertiary structure nor site-specific interactions between individual residues. Similar electrostatically dominated interactions have also been identified for positively charged IDPs binding to nucleic acids. These highly disordered polyelectrolyte complexes constitute an extreme case within the spectrum of biomolecular interactions involving disorder. Such interactions are likely to be widespread, since sequence analysis predicts proteins with highly charged disordered regions to be surprisingly numerous. Here, we summarize the insights that have emerged from the highly disordered polyelectrolyte complexes identified so far, and we highlight recent developments and future challenges in (i) establishing models for the underlying highly dynamic structural ensembles, (ii) understanding the novel binding mechanisms associated with them, and (iii) identifying the functional consequences.
Copyright © 2019 Elsevier Ltd. All rights reserved.

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Year:  2019        PMID: 31874413     DOI: 10.1016/j.sbi.2019.12.006

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  19 in total

Review 1.  Templated folding of intrinsically disordered proteins.

Authors:  Angelo Toto; Francesca Malagrinò; Lorenzo Visconti; Francesca Troilo; Livia Pagano; Maurizio Brunori; Per Jemth; Stefano Gianni
Journal:  J Biol Chem       Date:  2020-04-06       Impact factor: 5.157

2.  Transient exposure of a buried phosphorylation site in an autoinhibited protein.

Authors:  Simone Orioli; Carl G Henning Hansen; Kresten Lindorff-Larsen
Journal:  Biophys J       Date:  2021-12-03       Impact factor: 4.033

3.  Structural Mechanism of TAF-Iβ Chaperone Function on Linker Histone H1.10.

Authors:  Haniqao Feng; Bing-Rui Zhou; Charles D Schwieters; Yawen Bai
Journal:  J Mol Biol       Date:  2022-07-21       Impact factor: 6.151

4.  Affinity of disordered protein complexes is modulated by entropy-energy reinforcement.

Authors:  Milan Kumar Hazra; Yaakov Levy
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-21       Impact factor: 12.779

5.  Release of linker histone from the nucleosome driven by polyelectrolyte competition with a disordered protein.

Authors:  Pétur O Heidarsson; Davide Mercadante; Andrea Sottini; Daniel Nettels; Madeleine B Borgia; Alessandro Borgia; Sinan Kilic; Beat Fierz; Robert B Best; Benjamin Schuler
Journal:  Nat Chem       Date:  2022-01-06       Impact factor: 24.274

Review 6.  FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.

Authors:  Eitan Lerner; Anders Barth; Jelle Hendrix; Benjamin Ambrose; Victoria Birkedal; Scott C Blanchard; Richard Börner; Hoi Sung Chung; Thorben Cordes; Timothy D Craggs; Ashok A Deniz; Jiajie Diao; Jingyi Fei; Ruben L Gonzalez; Irina V Gopich; Taekjip Ha; Christian A Hanke; Gilad Haran; Nikos S Hatzakis; Sungchul Hohng; Seok-Cheol Hong; Thorsten Hugel; Antonino Ingargiola; Chirlmin Joo; Achillefs N Kapanidis; Harold D Kim; Ted Laurence; Nam Ki Lee; Tae-Hee Lee; Edward A Lemke; Emmanuel Margeat; Jens Michaelis; Xavier Michalet; Sua Myong; Daniel Nettels; Thomas-Otavio Peulen; Evelyn Ploetz; Yair Razvag; Nicole C Robb; Benjamin Schuler; Hamid Soleimaninejad; Chun Tang; Reza Vafabakhsh; Don C Lamb; Claus Am Seidel; Shimon Weiss
Journal:  Elife       Date:  2021-03-29       Impact factor: 8.140

7.  Can sequence-specific and dynamics-based metrics allow us to decipher the function in IDP sequences?

Authors:  S Banu Ozkan
Journal:  Biophys J       Date:  2021-04-16       Impact factor: 4.033

8.  Polyelectrolyte interactions enable rapid association and dissociation in high-affinity disordered protein complexes.

Authors:  Andrea Sottini; Alessandro Borgia; Madeleine B Borgia; Katrine Bugge; Daniel Nettels; Aritra Chowdhury; Pétur O Heidarsson; Franziska Zosel; Robert B Best; Birthe B Kragelund; Benjamin Schuler
Journal:  Nat Commun       Date:  2020-11-12       Impact factor: 14.919

9.  Entropic pressure controls the oligomerization of the Vibrio cholerae ParD2 antitoxin.

Authors:  Gabriela Garcia-Rodriguez; Yana Girardin; Alexander N Volkov; Ranjan Kumar Singh; Gopinath Muruganandam; Jeroen Van Dyck; Frank Sobott; Wim Versées; Daniel Charlier; Remy Loris
Journal:  Acta Crystallogr D Struct Biol       Date:  2021-06-18       Impact factor: 7.652

10.  Investigating the ferric ion binding site of magnetite biomineralisation protein Mms6.

Authors:  Andrea E Rawlings; Panah Liravi; Sybilla Corbett; Alex S Holehouse; Sarah S Staniland
Journal:  PLoS One       Date:  2020-02-25       Impact factor: 3.240

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