Literature DB >> 31874225

Structural and mechanistic aspects of carotenoid cleavage dioxygenases (CCDs).

Anahita Daruwalla1, Philip D Kiser2.   

Abstract

Carotenoid cleavage dioxygenases (CCDs) comprise a superfamily of mononuclear non-heme iron proteins that catalyze the oxygenolytic fission of alkene bonds in carotenoids to generate apocarotenoid products. Some of these enzymes exhibit additional activities such as carbon skeleton rearrangement and trans-cis isomerization. The group also includes a subfamily of enzymes that split the interphenyl alkene bond in molecules such as resveratrol and lignostilbene. CCDs are involved in numerous biological processes ranging from production of light-sensing chromophores to degradation of lignin derivatives in pulping waste sludge. These enzymes exhibit unique features that distinguish them from other families of non-heme iron enzymes. The distinctive properties and biological importance of CCDs have stimulated interest in their modes of catalysis. Recent structural, spectroscopic, and computational studies have helped clarify mechanistic aspects of CCD catalysis. Here, we review these findings emphasizing common and unique properties of CCDs that enable their variable substrate specificity and regioselectivity. This article is part of a Special Issue entitled Carotenoids recent advances in cell and molecular biology edited by Johannes von Lintig and Loredana Quadro. Published by Elsevier B.V.

Entities:  

Keywords:  Beta-propeller; Dioxetane; Monotopic membrane protein; Nitric oxide; Non-heme iron; Resveratrol

Year:  2019        PMID: 31874225      PMCID: PMC7308199          DOI: 10.1016/j.bbalip.2019.158590

Source DB:  PubMed          Journal:  Biochim Biophys Acta Mol Cell Biol Lipids        ISSN: 1388-1981            Impact factor:   4.698


  102 in total

1.  Genetic control of abscisic acid biosynthesis in maize.

Authors:  B C Tan; S H Schwartz; J A Zeevaart; D R McCarty
Journal:  Proc Natl Acad Sci U S A       Date:  1997-10-28       Impact factor: 11.205

2.  Inference of macromolecular assemblies from crystalline state.

Authors:  Evgeny Krissinel; Kim Henrick
Journal:  J Mol Biol       Date:  2007-05-13       Impact factor: 5.469

3.  Characterization of three members of the Arabidopsis carotenoid cleavage dioxygenase family demonstrates the divergent roles of this multifunctional enzyme family.

Authors:  Michele E Auldridge; Anna Block; Jonathan T Vogel; Carole Dabney-Smith; Isabelle Mila; Mondher Bouzayen; Maria Magallanes-Lundback; Dean DellaPenna; Donald R McCarty; Harry J Klee
Journal:  Plant J       Date:  2006-03       Impact factor: 6.417

Review 4.  Structural basis of carotenoid cleavage: from bacteria to mammals.

Authors:  Xuewu Sui; Philip D Kiser; Johannes von Lintig; Krzysztof Palczewski
Journal:  Arch Biochem Biophys       Date:  2013-07-01       Impact factor: 4.013

5.  Biochemical properties of purified recombinant human beta-carotene 15,15'-monooxygenase.

Authors:  Annika Lindqvist; Stefan Andersson
Journal:  J Biol Chem       Date:  2002-04-17       Impact factor: 5.157

Review 6.  Colors with functions: elucidating the biochemical and molecular basis of carotenoid metabolism.

Authors:  Johannes von Lintig
Journal:  Annu Rev Nutr       Date:  2010-08-21       Impact factor: 11.848

7.  Substrate specificity and kinetics for VP14, a carotenoid cleavage dioxygenase in the ABA biosynthetic pathway.

Authors:  Steven H Schwartz; Bao C Tan; Donald R McCarty; William Welch; Jan A D Zeevaart
Journal:  Biochim Biophys Acta       Date:  2003-01-02

8.  Evidence for compartmentalization of mammalian carotenoid metabolism.

Authors:  Grzegorz Palczewski; Jaume Amengual; Charles L Hoppel; Johannes von Lintig
Journal:  FASEB J       Date:  2014-07-07       Impact factor: 5.191

9.  Catalytic mechanism of a retinoid isomerase essential for vertebrate vision.

Authors:  Philip D Kiser; Jianye Zhang; Mohsen Badiee; Qingjiang Li; Wuxian Shi; Xuewu Sui; Marcin Golczak; Gregory P Tochtrop; Krzysztof Palczewski
Journal:  Nat Chem Biol       Date:  2015-04-20       Impact factor: 15.040

10.  Dali server update.

Authors:  Liisa Holm; Laura M Laakso
Journal:  Nucleic Acids Res       Date:  2016-04-29       Impact factor: 16.971

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  11 in total

1.  Structural basis for carotenoid cleavage by an archaeal carotenoid dioxygenase.

Authors:  Anahita Daruwalla; Jianye Zhang; Ho Jun Lee; Nimesh Khadka; Erik R Farquhar; Wuxian Shi; Johannes von Lintig; Philip D Kiser
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-03       Impact factor: 11.205

2.  The human mitochondrial enzyme BCO2 exhibits catalytic activity toward carotenoids and apocarotenoids.

Authors:  Linda D Thomas; Sepalika Bandara; Vipulkumar M Parmar; Ramkumar Srinivasagan; Nimesh Khadka; Marcin Golczak; Philip D Kiser; Johannes von Lintig
Journal:  J Biol Chem       Date:  2020-09-01       Impact factor: 5.157

3.  The Structural and Biochemical Basis of Apocarotenoid Processing by β-Carotene Oxygenase-2.

Authors:  Sepalika Bandara; Linda D Thomas; Srinivasagan Ramkumar; Nimesh Khadka; Philip D Kiser; Marcin Golczak; Johannes von Lintig
Journal:  ACS Chem Biol       Date:  2021-02-18       Impact factor: 5.100

4.  Carotenoid cleavage dioxygenases (HD-CCD1A and B) contribute as strong negative regulators of β-carotene in Indian bread wheat (cv. HD2967).

Authors:  Nandita Thakur; Neha Thakur; Shahirina Khan; Ajay K Pandey; Siddharth Tiwari
Journal:  3 Biotech       Date:  2021-04-16       Impact factor: 2.406

5.  Structural and functional analysis of lignostilbene dioxygenases from Sphingobium sp. SYK-6.

Authors:  Eugene Kuatsjah; Anson C K Chan; Rui Katahira; Stefan J Haugen; Gregg T Beckham; Michael E P Murphy; Lindsay D Eltis
Journal:  J Biol Chem       Date:  2021-05-06       Impact factor: 5.157

Review 6.  Pathways and disease-causing alterations in visual chromophore production for vertebrate vision.

Authors:  Philip D Kiser; Krzysztof Palczewski
Journal:  J Biol Chem       Date:  2020-11-23       Impact factor: 5.157

7.  Structural and Functional Analysis of Nonheme Iron Enzymes BCMO-1 and BCMO-2 from Caenorhabditis elegans.

Authors:  Weimin Pan; Yong-Ling Zhou; Jian Wang; Huai-En Dai; Xiao Wang; Lin Liu
Journal:  Front Mol Biosci       Date:  2022-02-10

8.  Overexpression of a carrot BCH gene, DcBCH1, improves tolerance to drought in Arabidopsis thaliana.

Authors:  Tong Li; Jie-Xia Liu; Yuan-Jie Deng; Zhi-Sheng Xu; Ai-Sheng Xiong
Journal:  BMC Plant Biol       Date:  2021-10-18       Impact factor: 4.215

9.  Identifying Bixa orellana L. New Carotenoid Cleavage Dioxygenases 1 and 4 Potentially Involved in Bixin Biosynthesis.

Authors:  Rosa Us-Camas; Margarita Aguilar-Espinosa; Jacobo Rodríguez-Campos; Alba Adriana Vallejo-Cardona; Víctor Manuel Carballo-Uicab; Hugo Serrano-Posada; Renata Rivera-Madrid
Journal:  Front Plant Sci       Date:  2022-02-11       Impact factor: 5.753

Review 10.  Molecular components affecting ocular carotenoid and retinoid homeostasis.

Authors:  Johannes von Lintig; Jean Moon; Darwin Babino
Journal:  Prog Retin Eye Res       Date:  2020-04-25       Impact factor: 21.198

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