Literature DB >> 31869589

RNA lifetime control, from stereochemistry to gene expression.

Tom Dendooven1, Ben F Luisi2, Katarzyna J Bandyra3.   

Abstract

Through the activities of various multi-component assemblies, protein-coding transcripts can be chaperoned toward protein synthesis or nudged into a funnel of rapid destruction. The capacity of these machine-like assemblies to tune RNA lifetime underpins the harmony of gene expression in all cells. Some of the molecular machines that mediate transcript turnover also contribute to on-the-fly surveillance of aberrant mRNAs and non-coding RNAs. How these dynamic assemblies distinguish functional RNAs from those that must be degraded is an intriguing puzzle for understanding the regulation of gene expression and dysfunction associated with disease. Recent data illuminate what the machines look like, and how they find, recognise and operate on transcripts to sculpt the dynamic regulatory landscape. This review captures current structural and mechanistic insights into the key enzymes and their effector assemblies that contribute to the fate-determining decision points for RNA in post-transcriptional control of genetic information.
Copyright © 2019 Elsevier Ltd. All rights reserved.

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Year:  2019        PMID: 31869589     DOI: 10.1016/j.sbi.2019.10.002

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  3 in total

1.  Multi-scale ensemble properties of the Escherichia coli RNA degradosome.

Authors:  Tom Dendooven; Giulia Paris; Alexander V Shkumatov; Md Saiful Islam; Alister Burt; Marta A Kubańska; Tai Yuchen Yang; Steven W Hardwick; Ben F Luisi
Journal:  Mol Microbiol       Date:  2021-09-25       Impact factor: 3.979

2.  Multi-omics approach reveals posttranscriptionally regulated genes are essential for human pluripotent stem cells.

Authors:  Mio Iwasaki; Yuka Kawahara; Chikako Okubo; Tatsuya Yamakawa; Michiko Nakamura; Tsuyoshi Tabata; Yohei Nishi; Megumi Narita; Akira Ohta; Hirohide Saito; Takuya Yamamoto; Masato Nakagawa; Shinya Yamanaka; Kazutoshi Takahashi
Journal:  iScience       Date:  2022-04-25

3.  Ribosomal RNA-Depletion Provides an Efficient Method for Successful Dual RNA-Seq Expression Profiling of a Marine Sponge Holobiont.

Authors:  Xueyan Xiang; Davide Poli; Bernard M Degnan; Sandie M Degnan
Journal:  Mar Biotechnol (NY)       Date:  2022-07-27       Impact factor: 3.727

  3 in total

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