| Literature DB >> 31864810 |
Lyudmila Dimitrova-Paternoga1, Pravin Kumar Ankush Jagtap1, Po-Chia Chen1, Janosch Hennig2.
Abstract
Ribonucleoprotein complexes (RNPs) are central to all processes in the cell. One of the prerequisites to understand how RNPs work is to determine their high-resolution structures. With the recent revolution in cryoelectron microscopy this task has become easier for large RNP machines, such as ribosomes, spliceosomes, and polymerases. However, the transient and highly dynamic nature of many RNPs makes structure determination a challenging task. Thus, an integrative structural and molecular biology approach is required, tackling three key challenges: (1) identification of cognate RNA sequences; (2) collection of structural data by conducting X-ray crystallography, NMR, electron microscopy, small-angle scattering (SAS), and other experiments; and (3) the creation of structural models that integrates all experimental restraints. Given the breadth of expertise required, this review presents an overview of available methods and successful examples with the goal to provide readers with a selection of promising options for structure determination of RNPs.Keywords: NMR; RNA; RNA binding domain; RNA binding protein; RNA motif identification; RNA recognition; RNP; integrative structural biology; protein-RNA complexes; structural biology; structure modeling
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Year: 2019 PMID: 31864810 DOI: 10.1016/j.str.2019.11.017
Source DB: PubMed Journal: Structure ISSN: 0969-2126 Impact factor: 5.006