| Literature DB >> 31861890 |
Rekha Viswanathan1, Sridhar P Arjunan2, Adrian Bingham1, Beth Jelfs1, Peter Kempster3, Sanjay Raghav1,3, Dinesh K Kumar1.
Abstract
In this paper, we have investigated the differences in the voices of Parkinson's disease (PD) and age-matched control (CO) subjects when uttering three phonemes using two complexity measures: fractal dimension (FD) and normalised mutual information (NMI). Three sustained phonetic voice recordings, /a/, /u/ and /m/, from 22 CO (mean age = 66.91) and 24 PD (mean age = 71.83) participants were analysed. FD was first computed for PD and CO voice recordings, followed by the computation of NMI between the test groups: PD-CO, PD-PD and CO-CO. Four features reported in the literature-normalised pitch period entropy (Norm. PPE), glottal-to-noise excitation ratio (GNE), detrended fluctuation analysis (DFA) and glottal closing quotient (ClQ)-were also computed for comparison with the proposed complexity measures. The statistical significance of the features was tested using a one-way ANOVA test. Support vector machine (SVM) with a linear kernel was used to classify the test groups, using a leave-one-out validation method. The results showed that PD voice recordings had lower FD compared to CO (p < 0.008). It was also observed that the average NMI between CO voice recordings was significantly lower compared with the CO-PD and PD-PD groups (p < 0.036) for the three phonetic sounds. The average NMI and FD demonstrated higher accuracy (>80%) in differentiating the test groups compared with other speech feature-based classifications. This study has demonstrated that the voices of PD patients has reduced FD, and NMI between voice recordings of PD-CO and PD-PD is higher compared with CO-CO. This suggests that the use of NMI obtained from the sample voice, when paired with known groups of CO and PD, can be used to identify PD voices. These findings could have applications for population screening.Entities:
Keywords: Parkinson’s disease; complexity; dysarthria; fractal dimension; normalised mutual information; sustained phonemes
Mesh:
Year: 2019 PMID: 31861890 PMCID: PMC7168233 DOI: 10.3390/bios10010001
Source DB: PubMed Journal: Biosensors (Basel) ISSN: 2079-6374
Participant clinical information.
| PD Subjects | CO | |
|---|---|---|
| Number of subjects | 24 | 22 |
| Age | 71.83 ± 7.67 | 66.91 ± 6.22 |
| UPDRS-III motor assessment | 27.58 ± 2.58 | 2.64 ± 3.65 |
| MoCA | 27.58 ± 2.48 | 28.45 ± 1.37 |
| Duration of disease in years | 5.63 ± 3.00 | - |
| Range of speech score in UPDRS | 0–1 | 0 |
Figure 1Venn diagram representing the relationship between MI and the entropies of X and Y in Equation (4).
FD compared between PD patients and CO.
| Phonetic Sound | ||
|---|---|---|
| /a/ | 10.12 | 0.003 * |
| /u/ | 7.65 | 0.008 * |
| /m/ | 2.51 | 0.120 |
* denotes significance < 0.05.
Figure 295% CI plots for the features FD for PD and CO.
Figure 395% CI plots of average NMI values for CO–CO, PD–PD for /a/, /u/, /m/.
Range of average NMI values for CO–CO and PD–PD for three phonetic recordings.
| Phonetic Sound | PD | CO |
|---|---|---|
| Average NMI | ||
| /a/ | 0.212–0.304 | 0.192–0.276 |
| /u/ | 0.293–0.361 | 0.284–0.358 |
| /m/ | 0.291–0.414 | 0.289–0.384 |
The differences between within-group NMI features for PD and CO using one-way ANOVA.
| Feature | ||
|---|---|---|
| Average NMI /a/ | 10.18 | 0.003 * |
| Average NMI /u/ | 12.39 | 0.001 * |
| Average NMI /m/ | 12.38 | 0.001 * |
* denotes significance < 0.05.
Difference between CO–CO average NMI set and CO–PD off-state average NMI set using a one-way ANOVA test.
| Phonetic Signal | ||
|---|---|---|
| Average NMI /a/ | 4.62 | 0.037 * |
| Average NMI /u/ | 8.58 | 0.005 * |
| Average NMI /m/ | 6.33 | 0.016 * |
* denotes significance < 0.05.
Figure 495% CI plots for the average NMI of CO–CO and CO–PD for (a) /a/; (b) /u/; (c) /m/.
One-way ANOVA test of the features norm. PPE, GNE, DFA and ClQ between CO and PD off state.
| Feature | ||
|---|---|---|
| Phoneme /a/ | ||
| Norm. PPE | 0.017 | 0.898 |
| GNE | 2.765 | 0.103 |
| ClQ | 0.329 | 0.569 |
| DFA | 2.751 | 0.104 |
| Phoneme /u/ | ||
| Norm. PPE | 1.395 | 0.244 |
| GNE | 8.567 | 0.005 * |
| ClQ | 0.003 | 0.957 |
| DFA | 0.004 | 0.949 |
| Phoneme /m/ | ||
| Norm. PPE | 4.807 | 0.033 * |
| GNE | 3.321 | 0.075 |
| ClQ | 0.356 | 0.553 |
| DFA | 1.539 | 0.221 |
* denotes significance < 0.05.
Figure 595% CI plots for the features DFA and FD for PD and CO.
Classification results for the sustained phonetic sounds /a/, /u/ and /m/ using FD and NMI.
| Task | AUC | CA | TN/FN | FP/TP |
|---|---|---|---|---|
| /a/ | 0.83 | 0.76 | 16/5 | 6/19 |
| /u/ | 0.84 | 0.78 | 19/7 | 3/17 |
| /m/ | 0.83 | 0.78 | 17/5 | 5/19 |
| /a/ + /u/ + /m/ | 0.84 | 0.81 | 18/5 | 4/19 |
Classification results for the sustained phonetic sounds /a/, /u/ and /m/ using four features from the literature.
| Task | AUC | CA | TN/FN | FP/TP |
|---|---|---|---|---|
| /a/ | 0.17 | 0.46 | 10/13 | 12/11 |
| /u/ | 0.35 | 0.46 | 8/11 | 14/13 |
| /m/ | 0.73 | 0.65 | 12/6 | 10/18 |
| /a/ + /u/ + /m/ | 0.65 | 0.67 | 15/8 | 7/16 |