| Literature DB >> 31857165 |
Merve Nur Aydemir1, Ertan Mahir Korkmaz2.
Abstract
The rapidly growing number of mitogenomes in Hymenoptera have mostly been used to explain higher level phylogeny, however, there are inadequate studies that focused on the shared and distinctive patterns of mitogenome evolution. Here, the complete mitogenome of Neodiprion sertifer (Symphyta: Diprionidae) was reported for the first time and it was found to be the most rearranged mitogenome in Symphyta, with five rearrangement events. The mitogenome architectures and features were also investigated in 73 hymenopteran species. The observation of positive GC skews may be related with selective forces acting on mitogenomes with the high number of transversions than transitions. The number of rearrangements exhibited negative correlation with T% and positive with C% content, indicating a tight relation between the number of rearrangements and deamination mutations. The rearrangements also displayed a significant increment from Symphyta to Aculeate and transpositions were found to be the most common type. The rrnS-nd2 was the most rearranged gene cluster, revealing the frequent occurrence of illegitimate recombination via duplications. The nucleotide bias was more important in the codon and anticodon interactions than the expected "exact-match" pattern. The conservation rate of tRNAs seems to be unrelated to that of strand location, amino acid composition, codon family degeneracy.Entities:
Keywords: European pine sawfly; Gene rearrangements; Mitochondrial genome architecture
Mesh:
Year: 2019 PMID: 31857165 DOI: 10.1016/j.ijbiomac.2019.12.135
Source DB: PubMed Journal: Int J Biol Macromol ISSN: 0141-8130 Impact factor: 6.953